RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 LEKR1Q6ZMV7 388 aa18.23■□□□□ 0.51
IGHV3-47-201ENST00000425060 GTPBP2Q9BX10 602 aaKnown RBP18.23■□□□□ 0.51
IGHV3-47-201ENST00000425060 PACSIN1Q9BY11 444 aa18.23■□□□□ 0.51
IGHV3-47-201ENST00000425060 ZDHHC5Q9C0B5 715 aa18.23■□□□□ 0.51
IGHV3-47-201ENST00000425060 DONSONQ9NYP3 566 aa18.23■□□□□ 0.51
IGHV3-47-201ENST00000425060 TPX2Q9ULW0 747 aaKnown RBP18.23■□□□□ 0.51
IGHV3-47-201ENST00000425060 TBC1D3DA0A087WVF3 549 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 TBC1D3IA0A087WXS9 549 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 TBC1D3EA0A087X179 549 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 TBC1D3KA0A087X1G2 549 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 TBC1D3FA6NER0 549 aaPredicted RBP18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 UPK3BL1B0FP48 263 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 TBC1D3LB9A6J9 549 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 UPK3BL2E5RIL1 263 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 KPNA3O00505 521 aaPredicted RBP18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 BUB1O43683 1085 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 GSRP00390 522 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 TBC1D3HP0C7X1 549 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 RARAP10276 462 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 GRIA4P48058 902 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 DNA2P51530 1060 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 AFF3P51826 1226 aaKnown RBP18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 ATXN3P54252 364 aaPredicted RBP18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 PPP2CBP62714 309 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 PPP2CAP67775 309 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 SLC25A11Q02978 314 aaKnown RBP18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 DPYSQ14117 519 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 UAP1L1Q3KQV9 507 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 PPP6R3Q5H9R7 873 aaPredicted RBP18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 PPM1JQ5JR12 505 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 TBC1D3GQ6DHY5 549 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 TBC1D3CQ6IPX1 549 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 ARHGAP12Q8IWW6 846 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 TBC1D3Q8IZP1 549 aaPredicted RBP18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 ZNF564Q8TBZ8 553 aaPredicted RBP18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 GRIN3AQ8TCU5 1115 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 CASKIN2Q8WXE0 1202 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 HDAC8Q9BY41 377 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 TM6SF2Q9BZW4 377 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 SLC39A8Q9C0K1 460 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 RBSNQ9H1K0 784 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 PDFQ9HBH1 243 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 ZNHIT6Q9NWK9 470 aaKnown RBP18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 SPTBN2O15020 2390 aa18.22■□□□□ 0.51
IGHV3-47-201ENST00000425060 KNL1Q8NG31 2342 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 A0A1B0GVT2 93 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 MYO1FO00160 1098 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 TMCC1O94876 653 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 KCNK5O95279 499 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 TPM1P09493 284 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 H2AFZP0C0S5 128 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 CSRP1P21291 193 aaKnown RBP18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 RACK1P63244 317 aaKnown RBP18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 TSR1Q2NL82 804 aaKnown RBP18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 SMTNL2Q2TAL5 461 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 H2AFVQ71UI9 128 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 ERN2Q76MJ5 926 aaKnown RBP18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 POLNQ7Z5Q5 900 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 TRIM69Q86WT6 500 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 OR2AP1Q8NGE2 309 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 TEKT4Q8WW24 435 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 LRIG1Q96JA1 1093 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 TRIM5Q9C035 493 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 NHEJ1Q9H9Q4 299 aaPredicted RBP18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 UVRAGQ9P2Y5 699 aa18.21■□□□□ 0.51
IGHV3-47-201ENST00000425060 PLXNA2O75051 1894 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 AKR1B15C9JRZ8 316 aaPredicted RBP18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 J3KR12 359 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 WNT9AO14904 365 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 AKR1B10O60218 316 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 OPHN1O60890 802 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 CD59P13987 128 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 ITGB7P26010 798 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 PAPOLAP51003 745 aaKnown RBP18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 SNRPD1P62314 119 aaKnown RBP18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 CYTH1Q15438 398 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 KIF19Q2TAC6 998 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 MYLK3Q32MK0 819 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 PIP4P1Q86T03 277 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 GAS2L3Q86XJ1 694 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 CPNE8Q86YQ8 564 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 CNGA4Q8IV77 575 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 NPWQ8N729 165 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 NETO2Q8NC67 525 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 FAM71BQ8TC56 605 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 TSC1Q92574 1164 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 CELF6Q96J87 481 aaKnown RBP18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 SLC6A18Q96N87 628 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 ZWILCHQ9H900 591 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 PREBQ9HCU5 417 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 CTTNBP2NLQ9P2B4 639 aa18.2■□□□□ 0.5
IGHV3-47-201ENST00000425060 A0A1W2PR77 199 aa18.19■□□□□ 0.5
IGHV3-47-201ENST00000425060 DAPK3O43293 454 aa18.19■□□□□ 0.5
IGHV3-47-201ENST00000425060 PRAMEF11O60813 436 aa18.19■□□□□ 0.5
IGHV3-47-201ENST00000425060 POP4O95707 220 aaKnown RBP18.19■□□□□ 0.5
IGHV3-47-201ENST00000425060 WNT1P04628 370 aa18.19■□□□□ 0.5
IGHV3-47-201ENST00000425060 TMEM253P0C7T8 217 aa18.19■□□□□ 0.5
IGHV3-47-201ENST00000425060 IL4RP24394 825 aa18.19■□□□□ 0.5
IGHV3-47-201ENST00000425060 GKP32189 559 aa18.19■□□□□ 0.5
IGHV3-47-201ENST00000425060 ARSEP51690 589 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms