RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 GALR2O43603 387 aaPredicted RBP17.27■□□□□ 0.36
COL7A1-202ENST00000422991 SYNCRIPO60506 623 aaKnown RBP17.27■□□□□ 0.36
COL7A1-202ENST00000422991 PAPSS2O95340 614 aaPredicted RBP17.27■□□□□ 0.36
COL7A1-202ENST00000422991 GSRP00390 522 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 TUBB4AP04350 444 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 RBP3P10745 1247 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 CCNB1P14635 433 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 MMP13P45452 471 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 ATP5OP48047 213 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 RENBPP51606 427 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 DGKEP52429 567 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 RHOAP61586 193 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 SATB1Q01826 763 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 NHLH1Q02575 133 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 ZNF235Q14590 738 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 MARC1Q5VT66 337 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 OR2A12Q8NGT7 310 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 PSKH2Q96QS6 385 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 NAP1L3Q99457 506 aaPredicted RBP17.27■□□□□ 0.36
COL7A1-202ENST00000422991 IL12RB2Q99665 862 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 CINPQ9BW66 212 aaPredicted RBP17.27■□□□□ 0.36
COL7A1-202ENST00000422991 TM6SF2Q9BZW4 377 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 IRF2BPLQ9H1B7 796 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 SPATA6Q9NWH7 488 aaPredicted RBP17.27■□□□□ 0.36
COL7A1-202ENST00000422991 SMARCAL1Q9NZC9 954 aa17.27■□□□□ 0.36
COL7A1-202ENST00000422991 BCLAF3A2AJT9 711 aaKnown RBP17.26■□□□□ 0.35
COL7A1-202ENST00000422991 MUSKO15146 869 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 LIASO43766 372 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 HSPA9P38646 679 aaKnown RBP17.26■□□□□ 0.35
COL7A1-202ENST00000422991 CCR3P51677 355 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 TCF15Q12870 199 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 ZBTB17Q13105 803 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 ELAVL3Q14576 367 aaKnown RBP17.26■□□□□ 0.35
COL7A1-202ENST00000422991 ATXN7L2Q5T6C5 722 aaPredicted RBP17.26■□□□□ 0.35
COL7A1-202ENST00000422991 CREG2Q8IUH2 290 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 PLPP6Q8IY26 295 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 PGBD5Q8N414 524 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 DTWD2Q8NBA8 298 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 TSEN2Q8NCE0 465 aaKnown RBP17.26■□□□□ 0.35
COL7A1-202ENST00000422991 OR2AP1Q8NGE2 309 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 C1orf54Q8WWF1 131 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 NKD2Q969F2 451 aaPredicted RBP17.26■□□□□ 0.35
COL7A1-202ENST00000422991 ERLEC1Q96DZ1 483 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 CCDC114Q96M63 670 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 GDAP1L1Q96MZ0 367 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 C10orf88Q9H8K7 445 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 FBRSQ9HAH7 460 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 PRMT8Q9NR22 394 aaPredicted RBP17.26■□□□□ 0.35
COL7A1-202ENST00000422991 AMACRQ9UHK6 382 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 DNPEPQ9ULA0 475 aa17.26■□□□□ 0.35
COL7A1-202ENST00000422991 CACNA1IQ9P0X4 2223 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 ANKRD36A6QL64 1941 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 TCRBV21S2A2A0A5A6 115 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 ALOX15BO15296 676 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 MTSS1O43312 755 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 BNIP3LO60238 219 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 ZNF189O75820 626 aaPredicted RBP17.25■□□□□ 0.35
COL7A1-202ENST00000422991 IGSF6O95976 241 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 PTPN3P26045 913 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 RBL1P28749 1068 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 RECQLP46063 649 aaPredicted RBP17.25■□□□□ 0.35
COL7A1-202ENST00000422991 RGRP47804 291 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 CXCL12P48061 93 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 CCNHP51946 323 aaPredicted RBP17.25■□□□□ 0.35
COL7A1-202ENST00000422991 COPAP53621 1224 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 SNRPD1P62314 119 aaKnown RBP17.25■□□□□ 0.35
COL7A1-202ENST00000422991 WASHC5Q12768 1159 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 OASLQ15646 514 aaKnown RBP17.25■□□□□ 0.35
COL7A1-202ENST00000422991 CARD16Q5EG05 197 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 HEATR6Q6AI08 1181 aaKnown RBP17.25■□□□□ 0.35
COL7A1-202ENST00000422991 DARS2Q6PI48 645 aaKnown RBP17.25■□□□□ 0.35
COL7A1-202ENST00000422991 DPY19L3Q6ZPD9 716 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 STK40Q8N2I9 435 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 BBS5Q8N3I7 341 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 PRELID2Q8N945 189 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 OR2T3Q8NH03 318 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 HTR3CQ8WXA8 447 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 EXOC2Q96KP1 924 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 CAPZA3Q96KX2 299 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 HHIPQ96QV1 700 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 MGME1Q9BQP7 344 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 POLMQ9NP87 494 aaPredicted RBP17.25■□□□□ 0.35
COL7A1-202ENST00000422991 NT5MQ9NPB1 228 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 SEPT10Q9P0V9 454 aa17.25■□□□□ 0.35
COL7A1-202ENST00000422991 K7ESF4 209 aa17.24■□□□□ 0.35
COL7A1-202ENST00000422991 RNF103O00237 685 aa17.24■□□□□ 0.35
COL7A1-202ENST00000422991 JCHAINP01591 159 aa17.24■□□□□ 0.35
COL7A1-202ENST00000422991 HLA-DQB2P05538 268 aa17.24■□□□□ 0.35
COL7A1-202ENST00000422991 C7P10643 843 aa17.24■□□□□ 0.35
COL7A1-202ENST00000422991 CSNK1DP48730 415 aa17.24■□□□□ 0.35
COL7A1-202ENST00000422991 NSUN2Q08J23 767 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL7A1-202ENST00000422991 BYSLQ13895 437 aaKnown RBP17.24■□□□□ 0.35
COL7A1-202ENST00000422991 CCNG2Q16589 344 aa17.24■□□□□ 0.35
COL7A1-202ENST00000422991 ALG1LQ6GMV1 187 aa17.24■□□□□ 0.35
COL7A1-202ENST00000422991 DRICH1Q6PGQ1 229 aaPredicted RBP17.24■□□□□ 0.35
COL7A1-202ENST00000422991 CNTD1Q8N815 330 aa17.24■□□□□ 0.35
COL7A1-202ENST00000422991 CHST14Q8NCH0 376 aa17.24■□□□□ 0.35
COL7A1-202ENST00000422991 TSTD1Q8NFU3 115 aa17.24■□□□□ 0.35
COL7A1-202ENST00000422991 OR8D1Q8WZ84 308 aa17.24■□□□□ 0.35
COL7A1-202ENST00000422991 FAM129BQ96TA1 746 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms