RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 AKR1B10O60218 316 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 LEFTY1O75610 366 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 KCNA4P22459 653 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 CSNK1EP49674 416 aaKnown RBP19.19■□□□□ 0.66
TRIM56-202ENST00000412507 CCNHP51946 323 aaPredicted RBP19.19■□□□□ 0.66
TRIM56-202ENST00000412507 PPP2CBP62714 309 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 PPP2CAP67775 309 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 GRIK2Q13002 908 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 TBX2Q13207 712 aaPredicted RBP19.19■□□□□ 0.66
TRIM56-202ENST00000412507 SERINC3Q13530 473 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 SMTNL2Q2TAL5 461 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 PARP15Q460N3 678 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 RFX8Q6ZV50 586 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 NIPA2Q8N8Q9 360 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 ZNF564Q8TBZ8 553 aaPredicted RBP19.19■□□□□ 0.66
TRIM56-202ENST00000412507 ISG20Q96AZ6 181 aaKnown RBP19.19■□□□□ 0.66
TRIM56-202ENST00000412507 CELF6Q96J87 481 aaKnown RBP19.19■□□□□ 0.66
TRIM56-202ENST00000412507 HEPHQ9BQS7 1158 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 RBSNQ9H1K0 784 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 ZWILCHQ9H900 591 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 TM9SF3Q9HD45 589 aa19.19■□□□□ 0.66
TRIM56-202ENST00000412507 CWC15Q9P013 229 aaKnown RBP19.19■□□□□ 0.66
TRIM56-202ENST00000412507 A0A1B0GVT2 93 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 A0A1W2PPC4 97 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 MED19A0JLT2 244 aaPredicted RBP19.18■□□□□ 0.66
TRIM56-202ENST00000412507 ZSCAN5CA6NGD5 496 aaPredicted RBP19.18■□□□□ 0.66
TRIM56-202ENST00000412507 C10orf142B7Z368 130 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 MYO1FO00160 1098 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 SLC7A4O43246 635 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 PLRG1O43660 514 aaKnown RBP19.18■□□□□ 0.66
TRIM56-202ENST00000412507 ERCC2P18074 760 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 CCR5P51681 352 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 BNC1Q01954 994 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 BOLA3Q53S33 107 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 PPM1JQ5JR12 505 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 PIP5KL1Q5T9C9 394 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 TXNRD3NBQ6F5E7 133 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 RYBPQ8N488 228 aaPredicted RBP19.18■□□□□ 0.66
TRIM56-202ENST00000412507 NETO2Q8NC67 525 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 CTNNBL1Q8WYA6 563 aaPredicted RBP19.18■□□□□ 0.66
TRIM56-202ENST00000412507 HSPH1Q92598 858 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 ZDHHC6Q9H6R6 413 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 LRRC19Q9H756 370 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 NHEJ1Q9H9Q4 299 aaPredicted RBP19.18■□□□□ 0.66
TRIM56-202ENST00000412507 DYRK4Q9NR20 520 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 CTTNBP2NLQ9P2B4 639 aa19.18■□□□□ 0.66
TRIM56-202ENST00000412507 HECAQ9UBI9 543 aaPredicted RBP19.18■□□□□ 0.66
TRIM56-202ENST00000412507 AKR1B15C9JRZ8 316 aaPredicted RBP19.17■□□□□ 0.66
TRIM56-202ENST00000412507 OPHN1O60890 802 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 TMCC1O94876 653 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 H2AFZP0C0S5 128 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 RARAP10276 462 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 GKP32189 559 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 AFF3P51826 1226 aaKnown RBP19.17■□□□□ 0.66
TRIM56-202ENST00000412507 NDST2P52849 883 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 TAS2R38P59533 333 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 LAYNQ6UX15 382 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 H2AFVQ71UI9 128 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 CNGA4Q8IV77 575 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 OR6K2Q8NGY2 324 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 CCDC42Q96M95 316 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 SLC39A8Q9C0K1 460 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 KDM4CQ9H3R0 1056 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 OSGEPQ9NPF4 335 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.17■□□□□ 0.66
TRIM56-202ENST00000412507 SPTLC3Q9NUV7 552 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 DONSONQ9NYP3 566 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 NCOR2Q9Y618 2525 aa19.17■□□□□ 0.66
TRIM56-202ENST00000412507 GSRP00390 522 aa19.16■□□□□ 0.66
TRIM56-202ENST00000412507 SSR1P43307 286 aaKnown RBP19.16■□□□□ 0.66
TRIM56-202ENST00000412507 HCAR3P49019 387 aa19.16■□□□□ 0.66
TRIM56-202ENST00000412507 PAPOLAP51003 745 aaKnown RBP19.16■□□□□ 0.66
TRIM56-202ENST00000412507 ZNF135P52742 658 aaPredicted RBP19.16■□□□□ 0.66
TRIM56-202ENST00000412507 SNRPD1P62314 119 aaKnown RBP19.16■□□□□ 0.66
TRIM56-202ENST00000412507 SLC25A11Q02978 314 aaKnown RBP19.16■□□□□ 0.66
TRIM56-202ENST00000412507 DPYSQ14117 519 aa19.16■□□□□ 0.66
TRIM56-202ENST00000412507 DPYSL2Q16555 572 aa19.16■□□□□ 0.66
TRIM56-202ENST00000412507 ATXN7L2Q5T6C5 722 aaPredicted RBP19.16■□□□□ 0.66
TRIM56-202ENST00000412507 ERN2Q76MJ5 926 aaKnown RBP19.16■□□□□ 0.66
TRIM56-202ENST00000412507 CPNE8Q86YQ8 564 aa19.16■□□□□ 0.66
TRIM56-202ENST00000412507 PLPP6Q8IY26 295 aa19.16■□□□□ 0.66
TRIM56-202ENST00000412507 OR2AP1Q8NGE2 309 aa19.16■□□□□ 0.66
TRIM56-202ENST00000412507 PPP1R16AQ96I34 528 aa19.16■□□□□ 0.66
TRIM56-202ENST00000412507 SLC6A18Q96N87 628 aa19.16■□□□□ 0.66
TRIM56-202ENST00000412507 ZDHHC5Q9C0B5 715 aa19.16■□□□□ 0.66
TRIM56-202ENST00000412507 UVRAGQ9P2Y5 699 aa19.16■□□□□ 0.66
TRIM56-202ENST00000412507 ARHGAP42A6NI28 874 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 H3BRJ5 948 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 J3KR12 359 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 KCNK5O95279 499 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 TMEM253P0C7T8 217 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 MAT2AP31153 395 aaKnown RBP19.15■□□□□ 0.66
TRIM56-202ENST00000412507 ARL4AP40617 200 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 GRIA4P48058 902 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 RHOAP61586 193 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 RACK1P63244 317 aaKnown RBP19.15■□□□□ 0.66
TRIM56-202ENST00000412507 FOXK2Q01167 660 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 CCDC15Q0P6D6 951 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 TEAD4Q15561 434 aa19.15■□□□□ 0.66
TRIM56-202ENST00000412507 INO80DQ53TQ3 878 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms