RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 PIN4Q9Y237 131 aaKnown RBP17.87■□□□□ 0.45
SMPD4-202ENST00000409031 IDH3AP50213 366 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 CACNB2Q08289 660 aaPredicted RBP17.87■□□□□ 0.45
SMPD4-202ENST00000409031 ZNF410Q86VK4 478 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 TMEM132CQ8N3T6 1108 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 ANKRD52Q8NB46 1076 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 KCTD4Q8WVF5 259 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 LRTOMTQ8WZ04 291 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 SERAC1Q96JX3 654 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 CD320Q9NPF0 282 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 PPLO60437 1756 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 KLF11O14901 512 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 FAM155BO75949 473 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 MPSTP25325 297 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 NDST1P52848 882 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 SAPCD2Q86UD0 394 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 TXNRD3Q86VQ6 643 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 DCPSQ96C86 337 aaKnown RBP17.87■□□□□ 0.45
SMPD4-202ENST00000409031 SLC22A2O15244 555 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 C2P06681 752 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 GPIP06744 558 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 CMC1Q7Z7K0 106 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 SPATA2LQ8IUW3 424 aaPredicted RBP17.87■□□□□ 0.45
SMPD4-202ENST00000409031 RASSF5Q8WWW0 418 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 FAM136AQ96C01 138 aa17.87■□□□□ 0.45
SMPD4-202ENST00000409031 KCNH1O95259 989 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 MLNP12872 115 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 RAB10P61026 200 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 PRKG2Q13237 762 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 PCID2Q5JVF3 399 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 KIAA1841Q6NSI8 718 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 DNAJC14Q6Y2X3 702 aaPredicted RBP17.86■□□□□ 0.45
SMPD4-202ENST00000409031 UTS2BQ765I0 119 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 SEC14L1Q92503 715 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 MARCH7Q9H992 704 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 TRMT13Q9NUP7 481 aaKnown RBP17.86■□□□□ 0.45
SMPD4-202ENST00000409031 MAGEL2Q9UJ55 1249 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 PCDHB12Q9Y5F1 795 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 E5RJQ4 531 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 TFEBP19484 476 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 SHMT1P34896 483 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 SEPHS1P49903 392 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 SOX10P56693 466 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 DCAF12L1Q5VU92 463 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 GK5Q6ZS86 529 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 NEK10Q6ZWH5 1172 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 TMEM110Q86TL2 294 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 TBCDQ9BTW9 1192 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 GPR63Q9BZJ6 419 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 HIPK3Q9H422 1215 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 TAS2R13Q9NYV9 303 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 SPASTQ9UBP0 616 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 ING4Q9UNL4 249 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 SNX8Q9Y5X2 465 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 DIP2AQ14689 1571 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 PAPSS1O43252 624 aaPredicted RBP17.86■□□□□ 0.45
SMPD4-202ENST00000409031 TMCC2O75069 709 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 IL6P05231 212 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 STAG3L1P0CL83 205 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 SLC2A3P11169 496 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 CDKN2BP42772 138 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 VWA5B1Q5TIE3 1220 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 RAB43Q86YS6 212 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 CLYBLQ8N0X4 340 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 RHOBTB2Q9BYZ6 727 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 ADPRHL2Q9NX46 363 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 IGSF9Q9P2J2 1179 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 TBC1D30Q9Y2I9 924 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 UMPSP11172 480 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 SOAT1P35610 550 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 YWHAZP63104 245 aaKnown RBP17.86■□□□□ 0.45
SMPD4-202ENST00000409031 CYP4Z1Q86W10 505 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 ACOX2Q99424 681 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 PDCD2LQ9BRP1 358 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 PTPRHQ9HD43 1115 aa17.86■□□□□ 0.45
SMPD4-202ENST00000409031 MYL12BO14950 172 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 CSDE1O75534 798 aaKnown RBP17.85■□□□□ 0.45
SMPD4-202ENST00000409031 HGFP14210 728 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 NPY5RQ15761 445 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 FSCN1Q16658 493 aaKnown RBP17.85■□□□□ 0.45
SMPD4-202ENST00000409031 C15orf59Q2T9L4 293 aaPredicted RBP17.85■□□□□ 0.45
SMPD4-202ENST00000409031 NIPAL1Q6NVV3 410 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 TMEM161BQ8NDZ6 487 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 SIX2Q9NPC8 291 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 POLE3Q9NRF9 147 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 GSTK1Q9Y2Q3 226 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 RIC1Q4ADV7 1423 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 LOC110117498-PIK3R3F6TDL0 507 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 MEIS2O14770 477 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 GNAZP19086 355 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 TPSB2P20231 275 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 ACO1P21399 889 aaKnown RBP17.85■□□□□ 0.45
SMPD4-202ENST00000409031 ECT2LQ008S8 904 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 ENPEPQ07075 957 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 RALGDSQ12967 914 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 TPSAB1Q15661 275 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 NECAB2Q7Z6G3 386 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 ACER1Q8TDN7 264 aa17.85■□□□□ 0.45
SMPD4-202ENST00000409031 SNRNP25Q9BV90 132 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms