RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 OR1E1P30953 314 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 SLC8A1P32418 973 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 ETFBP38117 255 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 SLC1A1P43005 524 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 STK19P49842 368 aaPredicted RBP18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 AFF3P51826 1226 aaKnown RBP18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 DPYSQ14117 519 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 DPYSL3Q14195 570 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 ACCSLQ4AC99 568 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 POLNQ7Z5Q5 900 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 MMAAQ8IVH4 418 aaKnown RBP18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 ZCCHC9Q8N567 271 aaKnown RBP18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 MINDY1Q8N5J2 469 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 NPWQ8N729 165 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 RTL3Q8N8U3 475 aaKnown RBP18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 DCAF4L2Q8NA75 395 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 SNX19Q92543 992 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 PTPRN2Q92932 1015 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 CSPG4P5Q96PW8 444 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 FAM129BQ96TA1 746 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 PSMB7Q99436 277 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 MTG2Q9H4K7 406 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 ETNK2Q9NVF9 386 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 TMEM248Q9NWD8 314 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 EIF2B4Q9UI10 523 aaKnown RBP18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 HS3ST2Q9Y278 367 aa18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 NYNRINQ9P2P1 1898 aaKnown RBP18.26■□□□□ 0.51
THUMPD2-202ENST00000403537 ILVBLA1L0T0 632 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 MID1O15344 667 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 SNAP91O60641 907 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 RNASEH2AO75792 299 aaKnown RBP18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 FTCDO95954 541 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 KRT1P04264 644 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 AMPD1P23109 780 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 GLDCP23378 1020 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 CD27P26842 260 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 MAOBP27338 520 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 ACVRL1P37023 503 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 CLCN6P51797 869 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 CCDC15Q0P6D6 951 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 KRT81Q14533 505 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 PSAPL1Q6NUJ1 521 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 TP53INP2Q8IXH6 220 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 STK40Q8N2I9 435 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 OR2T34Q8NGX1 318 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 FAM71BQ8TC56 605 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 FRS2Q8WU20 508 aa18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 C6orf106Q9H6K1 298 aaPredicted RBP18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 PACSIN2Q9UNF0 486 aaPredicted RBP18.25■□□□□ 0.51
THUMPD2-202ENST00000403537 CXorf51AA0A1B0GTR3 108 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 LRRD1A4D1F6 860 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 C3orf70A6NLC5 250 aaPredicted RBP18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 C1QTNF3-AMACRE9PGA6 284 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 H3BRJ5 948 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 SLC7A4O43246 635 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 CER1O95813 267 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 IL1BP01584 269 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 KRT7P08729 469 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 ERCC2P18074 760 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 PSMD8P48556 350 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 SLC20A2Q08357 652 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 GRIK2Q13002 908 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 DLG2Q15700 870 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 ZFYVE27Q5T4F4 411 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 KIAA0895LQ68EN5 471 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 RETSATQ6NUM9 610 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 RHOT1Q8IXI2 618 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 TXLNBQ8N3L3 684 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 SH2D3CQ8N5H7 860 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 KCTD6Q8NC69 237 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 SKA1Q96BD8 255 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 CELF6Q96J87 481 aaKnown RBP18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 CALN1Q9BXU9 219 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 TSGA10Q9BZW7 698 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 KLC2Q9H0B6 622 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 KDM4CQ9H3R0 1056 aa18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.24■□□□□ 0.51
THUMPD2-202ENST00000403537 A0A1W2PP55 124 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 USP27XA6NNY8 438 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 WASH4PA8MWX3 477 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 MCF2LO15068 1137 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 FGF10O15520 208 aaPredicted RBP18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 DAPK3O43293 454 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 KRT86O43790 486 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 FSBPO95073 299 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 ZNF883P0CG24 379 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 NUDT1P36639 197 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 ARL4AP40617 200 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 GRIA4P48058 902 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 MAPKAPK2P49137 400 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 CCR5P51681 352 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 GNA12Q03113 381 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 LLGL1Q15334 1064 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 N4BP2L1Q5TBK1 243 aaPredicted RBP18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 LRRC38Q5VT99 294 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 NT5DC3Q86UY8 548 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 REXO1L1PQ8IX06 675 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 ATP11CQ8NB49 1132 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 PCDH19Q8TAB3 1148 aa18.23■□□□□ 0.51
THUMPD2-202ENST00000403537 C1orf216Q8TAB5 229 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms