RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 SEPT3Q9UH03 358 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 PPM1HQ9ULR3 514 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 FCF1Q9Y324 198 aaKnown RBP17.97■□□□□ 0.47
CTNS-203ENST00000399306 SHROOM3Q8TF72 1996 aa17.97■□□□□ 0.47
CTNS-203ENST00000399306 PROB1E7EW31 1015 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 APOC4-APOC2K7ER74 178 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 PPP1R12AO14974 1030 aaPredicted RBP17.96■□□□□ 0.47
CTNS-203ENST00000399306 MATN3O15232 486 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 CST8O60676 142 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 POP4O95707 220 aaKnown RBP17.96■□□□□ 0.47
CTNS-203ENST00000399306 IGSF6O95976 241 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 APOC2P02655 101 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 CHRNA3P32297 505 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 MAPK8P45983 427 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 RHOAP61586 193 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 RAD51Q06609 339 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 CCDC15Q0P6D6 951 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 SLC10A2Q12908 348 aaPredicted RBP17.96■□□□□ 0.47
CTNS-203ENST00000399306 LBRQ14739 615 aaKnown RBP17.96■□□□□ 0.47
CTNS-203ENST00000399306 CYTH1Q15438 398 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 MAP7D1Q3KQU3 841 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 DPY19L3Q6ZPD9 716 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 ATOH1Q92858 354 aaPredicted RBP17.96■□□□□ 0.47
CTNS-203ENST00000399306 FAM131CQ96AQ9 280 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 ZC3H10Q96K80 434 aaKnown RBP17.96■□□□□ 0.47
CTNS-203ENST00000399306 GDAP1L1Q96MZ0 367 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 HEPHQ9BQS7 1158 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 OSBPL1AQ9BXW6 950 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 CPEB1Q9BZB8 566 aaKnown RBP17.96■□□□□ 0.47
CTNS-203ENST00000399306 PCED1AQ9H1Q7 454 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 CARD9Q9H257 536 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 EPC1Q9H2F5 836 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 PABPC3Q9H361 631 aaKnown RBP17.96■□□□□ 0.47
CTNS-203ENST00000399306 MTG2Q9H4K7 406 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 FZD4Q9ULV1 537 aa17.96■□□□□ 0.47
CTNS-203ENST00000399306 SLC7A4O43246 635 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 RPP40O75818 363 aaKnown RBP17.95■□□□□ 0.46
CTNS-203ENST00000399306 TJP3O95049 919 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 PYGMP11217 842 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 VAV1P15498 845 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 NUMBP49757 651 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 CCNHP51946 323 aaPredicted RBP17.95■□□□□ 0.46
CTNS-203ENST00000399306 PPIDQ08752 370 aaKnown RBP17.95■□□□□ 0.46
CTNS-203ENST00000399306 XRCC4Q13426 336 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 RPS6KA1Q15418 735 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 HEATR6Q6AI08 1181 aaKnown RBP17.95■□□□□ 0.46
CTNS-203ENST00000399306 KIAA1324Q6UXG2 1013 aaKnown RBP17.95■□□□□ 0.46
CTNS-203ENST00000399306 ARHGAP36Q6ZRI8 547 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 TP53INP2Q8IXH6 220 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 HCAR2Q8TDS4 363 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 P3H4Q92791 437 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 TUBGCP5Q96RT8 1024 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 CINPQ9BW66 212 aaPredicted RBP17.95■□□□□ 0.46
CTNS-203ENST00000399306 TPSD1Q9BZJ3 242 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 LHX3Q9UBR4 397 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 IL36AQ9UHA7 158 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 TPX2Q9ULW0 747 aaKnown RBP17.95■□□□□ 0.46
CTNS-203ENST00000399306 JRKLQ9Y4A0 524 aa17.95■□□□□ 0.46
CTNS-203ENST00000399306 HACD1B0YJ81 288 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 MTSS1O43312 755 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 HRO43593 1189 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 KRT10P13645 584 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 CES1P23141 567 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 SLC8A1P32418 973 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 PXNP49023 591 aaPredicted RBP17.94■□□□□ 0.46
CTNS-203ENST00000399306 TPMTP51580 245 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 MYLK3Q32MK0 819 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 MARC1Q5VT66 337 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 MMAAQ8IVH4 418 aaKnown RBP17.94■□□□□ 0.46
CTNS-203ENST00000399306 CCDC13Q8IYE1 715 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 TTC13Q8NBP0 860 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 PIP4K2CQ8TBX8 421 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 PPP1R16AQ96I34 528 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 TNKS2Q9H2K2 1166 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 KDM4CQ9H3R0 1056 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 SGK2Q9HBY8 427 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 PACSIN2Q9UNF0 486 aaPredicted RBP17.94■□□□□ 0.46
CTNS-203ENST00000399306 NCKAP1Q9Y2A7 1128 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 HEY1Q9Y5J3 304 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 ACTL7AQ9Y615 435 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 WASF2Q9Y6W5 498 aa17.94■□□□□ 0.46
CTNS-203ENST00000399306 IGHV1OR15-9A0A0B4J2B8 117 aa17.93■□□□□ 0.46
CTNS-203ENST00000399306 KIF5CO60282 957 aa17.93■□□□□ 0.46
CTNS-203ENST00000399306 IL1BP01584 269 aa17.93■□□□□ 0.46
CTNS-203ENST00000399306 AP1S1P61966 158 aa17.93■□□□□ 0.46
CTNS-203ENST00000399306 IFI35P80217 286 aaPredicted RBP17.93■□□□□ 0.46
CTNS-203ENST00000399306 ZNF235Q14590 738 aa17.93■□□□□ 0.46
CTNS-203ENST00000399306 KAZNQ674X7 775 aa17.93■□□□□ 0.46
CTNS-203ENST00000399306 ALG1LQ6GMV1 187 aa17.93■□□□□ 0.46
CTNS-203ENST00000399306 LOXL4Q96JB6 756 aa17.93■□□□□ 0.46
CTNS-203ENST00000399306 MGME1Q9BQP7 344 aa17.93■□□□□ 0.46
CTNS-203ENST00000399306 HDAC8Q9BY41 377 aa17.93■□□□□ 0.46
CTNS-203ENST00000399306 TM6SF2Q9BZW4 377 aa17.93■□□□□ 0.46
CTNS-203ENST00000399306 WSB2Q9NYS7 404 aaPredicted RBP17.93■□□□□ 0.46
CTNS-203ENST00000399306 ABCA7Q8IZY2 2146 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 MID1O15344 667 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 RHOBTB1O94844 696 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 CTSLP07711 333 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 CD6P30203 668 aa17.92■□□□□ 0.46
CTNS-203ENST00000399306 MMP13P45452 471 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms