RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 CCL22O00626 93 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 GAS2O43903 313 aaKnown RBP13.95□□□□□ -0.18
COL6A2-203ENST00000397763 AHSGP02765 367 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 PPARGP37231 505 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-203ENST00000397763 CCR3P51677 355 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 PDAP1Q13442 181 aaKnown RBP13.95□□□□□ -0.18
COL6A2-203ENST00000397763 SPANXN3Q5MJ09 141 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 STXBP5Q5T5C0 1151 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 KLHL35Q6PF15 583 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 C16orf89Q6UX73 402 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 MARVELD2Q8N4S9 558 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 PHF21BQ96EK2 531 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 BTBD9Q96Q07 612 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 RHOBTB2Q9BYZ6 727 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 SIK2Q9H0K1 926 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 TRPC7Q9HCX4 862 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 GIMAP2Q9UG22 337 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 ZNF510Q9Y2H8 683 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-203ENST00000397763 FAM149AA5PLN7 773 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 RECQL4O94761 1208 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 MYL4P12829 197 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 ADCYAP1R1P41586 468 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 PSMD7P51665 324 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 BCAT1P54687 386 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 LAMC2Q13753 1193 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 INSCQ1MX18 579 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 MFSD6LQ8IWD5 586 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 IPMKQ8NFU5 416 aa13.95□□□□□ -0.18
COL6A2-203ENST00000397763 NOL11Q9H8H0 719 aaKnown RBP13.95□□□□□ -0.18
COL6A2-203ENST00000397763 C6orf203Q9P0P8 240 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-203ENST00000397763 TCAF2A6NFQ2 919 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 ATP5BP06576 529 aaKnown RBP13.94□□□□□ -0.18
COL6A2-203ENST00000397763 CXCR3P49682 368 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 SOX4Q06945 474 aaPredicted RBP13.94□□□□□ -0.18
COL6A2-203ENST00000397763 LPIN1Q14693 890 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 TMEM151AQ8N4L1 468 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 EXT2Q93063 718 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 MRPS26Q9BYN8 205 aaKnown RBP13.94□□□□□ -0.18
COL6A2-203ENST00000397763 RAP2CQ9Y3L5 183 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 YJEFN3A6XGL0 299 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 ADM5C9JUS6 153 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 CLIC3O95833 236 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 SLC35E2BP0CK96 405 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 KCNA5P22460 613 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 TPI1P60174 286 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 SLC25A52Q3SY17 297 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 C9orf57Q5W0N0 161 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 ITPRIPL1Q6GPH6 555 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 CNSTQ6PJW8 725 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 C4orf22Q6V702 233 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 LPCAT2Q7L5N7 544 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 OSTM1Q86WC4 334 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 CENPLQ8N0S6 344 aaPredicted RBP13.94□□□□□ -0.18
COL6A2-203ENST00000397763 LRRC4Q9HBW1 653 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 FBRSL1Q9HCM7 1045 aaKnown RBP13.94□□□□□ -0.18
COL6A2-203ENST00000397763 RNF11Q9Y3C5 154 aa13.94□□□□□ -0.18
COL6A2-203ENST00000397763 DENRO43583 198 aaKnown RBP13.93□□□□□ -0.18
COL6A2-203ENST00000397763 TIPRLO75663 272 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 PGK1P00558 417 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 CCDC166P0CW27 439 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 MAPK10P53779 464 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 XIAPP98170 497 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 SEPT6Q14141 434 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 MGAT5BQ3V5L5 792 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 AGKQ53H12 422 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 LIPMQ5VYY2 423 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 RWDD4Q6NW29 188 aaKnown RBP13.93□□□□□ -0.18
COL6A2-203ENST00000397763 ESRP1Q6NXG1 681 aaKnown RBP13.93□□□□□ -0.18
COL6A2-203ENST00000397763 CLEC14AQ86T13 490 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 LDB1Q86U70 411 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-203ENST00000397763 TSNARE1Q96NA8 513 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 EPS15L1Q9UBC2 864 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 PSME4Q14997 1843 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 SAC3D1A6NKF1 404 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 DFFAO00273 331 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 AP2A1O95782 977 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 NCAM1P13591 858 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 HOXA11P31270 313 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-203ENST00000397763 TKTL1P51854 596 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 CBX3Q13185 183 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 CSHL1Q14406 222 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 FBXO48Q5FWF7 155 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 FBXO47Q5MNV8 452 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 CLEC6AQ6EIG7 209 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 KRT80Q6KB66 452 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 CYS1Q717R9 158 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 GPRIN1Q7Z2K8 1008 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 TMEM135Q86UB9 458 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 SIX6OS1Q8N1H7 587 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 TTC16Q8NEE8 873 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 RP9Q8TA86 221 aaKnown RBP13.93□□□□□ -0.18
COL6A2-203ENST00000397763 SREK1Q8WXA9 508 aaKnown RBP13.93□□□□□ -0.18
COL6A2-203ENST00000397763 ZFRQ96KR1 1074 aaKnown RBP13.93□□□□□ -0.18
COL6A2-203ENST00000397763 CAMKK2Q96RR4 588 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 TMEM79Q9BSE2 394 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 DRC3Q9H069 523 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 EFCAB1Q9HAE3 211 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 DDIT4Q9NX09 232 aa13.93□□□□□ -0.18
COL6A2-203ENST00000397763 RBPJLQ9UBG7 517 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms