RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 TMEM114B3SHH9 223 aa16.3■□□□□ 0.2
PDZD4-202ENST00000393758 E7ENX8 843 aa16.3■□□□□ 0.2
PDZD4-202ENST00000393758 CLIC3O95833 236 aa16.3■□□□□ 0.2
PDZD4-202ENST00000393758 EML4Q9HC35 981 aaKnown RBP16.3■□□□□ 0.2
PDZD4-202ENST00000393758 COL5A3P25940 1745 aaPredicted RBP16.29■□□□□ 0.2
PDZD4-202ENST00000393758 PDE4DIPQ5VU43 2346 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 H2AFYO75367 372 aaKnown RBP16.29■□□□□ 0.2
PDZD4-202ENST00000393758 CABYRO75952 493 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 JUNP05412 331 aaKnown RBP16.29■□□□□ 0.2
PDZD4-202ENST00000393758 EEF1DP29692 281 aaKnown RBP16.29■□□□□ 0.2
PDZD4-202ENST00000393758 HARS2P49590 506 aaKnown RBP16.29■□□□□ 0.2
PDZD4-202ENST00000393758 CCR3P51677 355 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 LDB1Q86U70 411 aaPredicted RBP16.29■□□□□ 0.2
PDZD4-202ENST00000393758 OFCC1Q8IZS5 231 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 DLG3Q92796 817 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 DRC3Q9H069 523 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 NXF3Q9H4D5 531 aaKnown RBP16.29■□□□□ 0.2
PDZD4-202ENST00000393758 GNGT2O14610 69 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 HPCAP84074 193 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 LAMC2Q13753 1193 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 RAB44Q7Z6P3 723 aaPredicted RBP16.29■□□□□ 0.2
PDZD4-202ENST00000393758 PCYOX1LQ8NBM8 494 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 GABPB2Q8TAK5 448 aaPredicted RBP16.29■□□□□ 0.2
PDZD4-202ENST00000393758 PLAC1Q9HBJ0 212 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 VTI1BQ9UEU0 232 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 SLCO1B7G3V0H7 640 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 H3BRB1 525 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 ZNF23P17027 643 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 PTPN3P26045 913 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 ICAM3P32942 547 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 TAF6P49848 677 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 INPP5AQ14642 412 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 ZIK1Q3SY52 487 aaPredicted RBP16.29■□□□□ 0.2
PDZD4-202ENST00000393758 SLC26A9Q7LBE3 791 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 ZNF560Q96MR9 790 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 TUT1Q9H6E5 874 aaKnown RBP16.29■□□□□ 0.2
PDZD4-202ENST00000393758 PFDN4Q9NQP4 134 aa16.29■□□□□ 0.2
PDZD4-202ENST00000393758 NRAPQ86VF7 1730 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 CLOCKO15516 846 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 ATP6V1G1O75348 118 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 BAIAP3O94812 1187 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 TFPTP0C1Z6 253 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 CCDC166P0CW27 439 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 NAB1Q13506 487 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 TUBB3Q13509 450 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 CAPRIN1Q14444 709 aaKnown RBP16.28■□□□□ 0.2
PDZD4-202ENST00000393758 OGFRL1Q5TC84 451 aaPredicted RBP16.28■□□□□ 0.2
PDZD4-202ENST00000393758 PGM2L1Q6PCE3 622 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 SLC35F5Q8WV83 523 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 WNT8BQ93098 351 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 EIF2AQ9BY44 585 aaKnown RBP16.28■□□□□ 0.2
PDZD4-202ENST00000393758 TRIM8Q9BZR9 551 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 OXSMQ9NWU1 459 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 GPRC5DQ9NZD1 345 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 LMCD1Q9NZU5 365 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 CRYL1Q9Y2S2 319 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 NCF1BA6NI72 391 aaPredicted RBP16.28■□□□□ 0.2
PDZD4-202ENST00000393758 NCF1CA8MVU1 366 aaPredicted RBP16.28■□□□□ 0.2
PDZD4-202ENST00000393758 MATN2O00339 956 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 NCF1P14598 390 aaPredicted RBP16.28■□□□□ 0.2
PDZD4-202ENST00000393758 UGT1A6P19224 532 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 PSMD7P51665 324 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 INHBCP55103 352 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 PLCL1Q15111 1095 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 ESRP1Q6NXG1 681 aaKnown RBP16.28■□□□□ 0.2
PDZD4-202ENST00000393758 ZDHHC17Q8IUH5 632 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 ARNTL2Q8WYA1 636 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 PRICKLE1Q96MT3 831 aaPredicted RBP16.28■□□□□ 0.2
PDZD4-202ENST00000393758 TKTL2Q9H0I9 626 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 ALG9Q9H6U8 611 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 MKS1Q9NXB0 559 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 ADAM28Q9UKQ2 775 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 LGALS2P05162 132 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 MYBPC1Q00872 1141 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 NIPAL4Q0D2K0 466 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 HFE2Q6ZVN8 426 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 TMEM110Q86TL2 294 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 GIPC3Q8TF64 312 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 CCDC68Q9H2F9 335 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 OR12D3Q9UGF7 316 aa16.28■□□□□ 0.2
PDZD4-202ENST00000393758 TADA2AO75478 443 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 ENDOD1O94919 500 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 PFKMP08237 780 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 STT3AP46977 705 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 CD151P48509 253 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 ADRM1Q16186 407 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 SLC25A52Q3SY17 297 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 SPPL2CQ8IUH8 684 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 CBR4Q8N4T8 237 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 MAGEE2Q8TD90 523 aaPredicted RBP16.27■□□□□ 0.2
PDZD4-202ENST00000393758 IL22Q9GZX6 179 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 SCN9AQ15858 1988 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 DLX3O60479 287 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 AP2A1O95782 977 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 NOS2P35228 1153 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 NAA20P61599 178 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 SCIMPQ6UWF3 145 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 CYP4V2Q6ZWL3 525 aaPredicted RBP16.27■□□□□ 0.2
PDZD4-202ENST00000393758 ZNF410Q86VK4 478 aa16.27■□□□□ 0.2
PDZD4-202ENST00000393758 APOBEC3FQ8IUX4 373 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms