RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 DLG3Q92796 817 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 RIBC2Q9H4K1 309 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 DDX20Q9UHI6 824 aaKnown RBP14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 LOC110117498-PIK3R3F6TDL0 507 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 SLITRK3O94933 977 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 RHOCP08134 193 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 ZNF12P17014 697 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 NAA20P61599 178 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 RGS1Q08116 209 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 VSIG10LQ86VR7 867 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 SNX32Q86XE0 403 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 PURBQ96QR8 312 aaKnown RBP14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 RNPEPL1Q9HAU8 725 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 GPAMQ9HCL2 828 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 EFR3BQ9Y2G0 817 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 ATRNO75882 1429 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 ATMINO43313 823 aaPredicted RBP14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 GLRA3O75311 464 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 KDM4BO94953 1096 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 GJA1P17302 382 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 SLC39A12Q504Y0 691 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 PPIL6Q8IXY8 311 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 UROC1Q96N76 676 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 BHLHE41Q9C0J9 482 aaPredicted RBP14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 PABPC3Q9H361 631 aaKnown RBP14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 SCUBE2Q9NQ36 999 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 PSMD11O00231 422 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 ITGALP20701 1170 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 CHI3L1P36222 383 aaPredicted RBP14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 MKRN4PQ13434 485 aaPredicted RBP14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 ZBTB8BQ8NAP8 495 aaPredicted RBP14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 KCNB2Q92953 911 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 NSMCE2Q96MF7 247 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 UGT2B28Q9BY64 529 aa14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.22□□□□□ -0.13
RAPGEF1-202ENST00000372190 TMEM150BA6NC51 233 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 MGRN1O60291 552 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 CYP3A4P08684 503 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 TKTL1P51854 596 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 PRMT2P55345 433 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 POMGNT2Q8NAT1 580 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 AKAP1Q92667 903 aaKnown RBP eCLIP14.21□□□□□ -0.137e-7■■■■□ 24.9
RAPGEF1-202ENST00000372190 CDH9Q9ULB4 789 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 ZNF451Q9Y4E5 1061 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 SPTLC1O15269 473 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 SULT1B1O43704 296 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 PTSQ03393 145 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 EPS8L3Q8TE67 593 aaKnown RBP14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 SLC9A6Q92581 669 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 SNX7Q9UNH6 387 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 MRPS7Q9Y2R9 242 aaKnown RBP14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 GRIP1Q9Y3R0 1128 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 SNCAIPQ9Y6H5 919 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 IFNA7P01567 189 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 NDUFV1P49821 464 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 C6orf183Q5T699 404 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 GARNL3Q5VVW2 1013 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 PTRHD1Q6GMV3 140 aaKnown RBP14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 SLC13A5Q86YT5 568 aaPredicted RBP14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 CCDC126Q96EE4 140 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 XPR1Q9UBH6 696 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 KNDC1Q76NI1 1749 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 LACTBL1A8MY62 500 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 ATP5BP06576 529 aaKnown RBP14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 ACAT1P24752 427 aaKnown RBP14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 S100GP29377 79 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 GRK3P35626 688 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 CDK20Q8IZL9 346 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 GAD1Q99259 594 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 CATSPERZQ9NTU4 200 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 RPS6KB2Q9UBS0 482 aa14.21□□□□□ -0.13
RAPGEF1-202ENST00000372190 DHX15O43143 795 aaKnown RBP14.21□□□□□ -0.14
RAPGEF1-202ENST00000372190 NADKO95544 446 aaPredicted RBP14.21□□□□□ -0.14
RAPGEF1-202ENST00000372190 ZMYND11Q15326 602 aa14.21□□□□□ -0.14
RAPGEF1-202ENST00000372190 KCNA10Q16322 511 aa14.21□□□□□ -0.14
RAPGEF1-202ENST00000372190 PDCD4Q53EL6 469 aaKnown RBP14.21□□□□□ -0.14
RAPGEF1-202ENST00000372190 TCEAL5Q5H9L2 206 aa14.21□□□□□ -0.14
RAPGEF1-202ENST00000372190 R3HCC1LQ7Z5L2 792 aaKnown RBP14.21□□□□□ -0.14
RAPGEF1-202ENST00000372190 SMARCD1Q96GM5 515 aa14.21□□□□□ -0.14
RAPGEF1-202ENST00000372190 FAM111AQ96PZ2 611 aa14.21□□□□□ -0.14
RAPGEF1-202ENST00000372190 SLC28A3Q9HAS3 691 aa14.21□□□□□ -0.14
RAPGEF1-202ENST00000372190 SPASTQ9UBP0 616 aa14.21□□□□□ -0.14
RAPGEF1-202ENST00000372190 REXO2Q9Y3B8 237 aaKnown RBP14.21□□□□□ -0.14
RAPGEF1-202ENST00000372190 H3BM21 787 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 PRLRP16471 622 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 KCNJ1P48048 391 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 AQP5P55064 265 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 RHEBQ15382 184 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 CCDC28AQ8IWP9 274 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 MYDGFQ969H8 173 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 RACGAP1Q9H0H5 632 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 ASB7Q9H672 318 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 CRLS1Q9UJA2 301 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 FAM240BA0A1B0GVZ2 78 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 FAM172BPA6NC97 362 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 H3BQF6 201 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 PDHA2P29803 388 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 SCNN1GP51170 649 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 POU4F1Q01851 419 aa14.2□□□□□ -0.14
RAPGEF1-202ENST00000372190 ZBTB6Q15916 424 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms