RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 MRPL57Q9BQC6 102 aaKnown RBP15.02■□□□□ -0
CHD4-201ENST00000357008 ACP6Q9NPH0 428 aa15.02■□□□□ -0
CHD4-201ENST00000357008 PACSIN3Q9UKS6 424 aa15.02■□□□□ -0
CHD4-201ENST00000357008 hCG_1818297A0A087WSY0 165 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 FGF10O15520 208 aaPredicted RBP15.02□□□□□ -0.01
CHD4-201ENST00000357008 TYMPP19971 482 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 GTF2A2P52657 109 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 CRADDP78560 199 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 LY6KQ17RY6 165 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 MFSD4BQ5TF39 518 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 UNC93AQ86WB7 457 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 POP5Q969H6 163 aaKnown RBP15.02□□□□□ -0.01
CHD4-201ENST00000357008 MTG1Q9BT17 334 aaPredicted RBP15.02□□□□□ -0.01
CHD4-201ENST00000357008 DMTF1Q9Y222 760 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 ITGA2BP08514 1039 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 AKAP5P24588 427 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 RAB27AP51159 221 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 ATP13A4Q4VNC1 1196 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 PERM1Q5SV97 790 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 SPESP1Q6UW49 350 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 RAD18Q9NS91 495 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 PLA2G4CQ9UP65 541 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 FAM50BQ9Y247 325 aa15.02□□□□□ -0.01
CHD4-201ENST00000357008 PEX11AO75192 247 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 UQCRBP14927 111 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 OAZ1P54368 228 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 IRF2BP2Q7Z5L9 587 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 RCN3Q96D15 328 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 SETD4Q9NVD3 440 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 KLQ9UEF7 1012 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 NUDT5Q9UKK9 219 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 PTPN3P26045 913 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 LIPMQ5VYY2 423 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 ALYREFQ86V81 257 aaKnown RBP15.01□□□□□ -0.01
CHD4-201ENST00000357008 ZNF410Q86VK4 478 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 SPATA20Q8TB22 786 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 DNAJB14Q8TBM8 379 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 MAGEC3Q8TD91 643 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 CCDC28BQ9BUN5 200 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 OSBPL6Q9BZF3 934 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 ARL15Q9NXU5 204 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 STAT5AP42229 794 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 GSTM5P46439 218 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 CRY1Q16526 586 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 QPCTQ16769 361 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 ABCB10Q9NRK6 738 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 MAPKAPK3Q16644 382 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 STXBP5Q5T5C0 1151 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 ZNF513Q8N8E2 541 aaPredicted RBP15.01□□□□□ -0.01
CHD4-201ENST00000357008 LENG9Q96B70 501 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 ZHX1-C8orf76Q96EF9 292 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 OSGEPL1Q9H4B0 414 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 MBD2Q9UBB5 411 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 REXO2Q9Y3B8 237 aaKnown RBP15.01□□□□□ -0.01
CHD4-201ENST00000357008 ZC3H13Q5T200 1668 aaKnown RBP15.01□□□□□ -0.01
CHD4-201ENST00000357008 ADRB2P07550 413 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 ZNF286BP0CG31 522 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 CLK2P49760 499 aaKnown RBP15.01□□□□□ -0.01
CHD4-201ENST00000357008 FAM83AQ86UY5 434 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 ZNF540Q8NDQ6 660 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 SELENOMQ8WWX9 145 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 BBS4Q96RK4 519 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 SNRNP25Q9BV90 132 aaKnown RBP15.01□□□□□ -0.01
CHD4-201ENST00000357008 CHID1Q9BWS9 393 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 ULBP1Q9BZM6 244 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 SPATC1LQ9H0A9 340 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 PORCNQ9H237 461 aa15.01□□□□□ -0.01
CHD4-201ENST00000357008 FBXO6Q9NRD1 293 aaPredicted RBP15.01□□□□□ -0.01
CHD4-201ENST00000357008 DHRS12A0PJE2 317 aa15□□□□□ -0.01
CHD4-201ENST00000357008 CYP7B1O75881 506 aa15□□□□□ -0.01
CHD4-201ENST00000357008 RAB10P61026 200 aa15□□□□□ -0.01
CHD4-201ENST00000357008 LACTB2Q53H82 288 aaPredicted RBP15□□□□□ -0.01
CHD4-201ENST00000357008 GPR107Q5VW38 600 aa15□□□□□ -0.01
CHD4-201ENST00000357008 EIF3MQ7L2H7 374 aaKnown RBP15□□□□□ -0.01
CHD4-201ENST00000357008 PPP3R2Q96LZ3 170 aa15□□□□□ -0.01
CHD4-201ENST00000357008 ZNF670Q9BS34 389 aa15□□□□□ -0.01
CHD4-201ENST00000357008 MAN1C1Q9NR34 630 aa15□□□□□ -0.01
CHD4-201ENST00000357008 KANSL3Q9P2N6 904 aa15□□□□□ -0.01
CHD4-201ENST00000357008 OR12D3Q9UGF7 316 aa15□□□□□ -0.01
CHD4-201ENST00000357008 BANF1O75531 89 aa15□□□□□ -0.01
CHD4-201ENST00000357008 URODP06132 367 aa15□□□□□ -0.01
CHD4-201ENST00000357008 ZNF549Q6P9A3 640 aa15□□□□□ -0.01
CHD4-201ENST00000357008 ARHGAP36Q6ZRI8 547 aa15□□□□□ -0.01
CHD4-201ENST00000357008 DEPDC4Q8N2C3 294 aa15□□□□□ -0.01
CHD4-201ENST00000357008 HAS1Q92839 578 aa15□□□□□ -0.01
CHD4-201ENST00000357008 VPS51Q9UID3 782 aa15□□□□□ -0.01
CHD4-201ENST00000357008 TRAP1Q12931 704 aaKnown RBP15□□□□□ -0.01
CHD4-201ENST00000357008 ZNF846Q147U1 533 aa15□□□□□ -0.01
CHD4-201ENST00000357008 KRT77Q7Z794 578 aa15□□□□□ -0.01
CHD4-201ENST00000357008 Q96MT0 163 aa15□□□□□ -0.01
CHD4-201ENST00000357008 CIPCQ9C0C6 399 aa15□□□□□ -0.01
CHD4-201ENST00000357008 ATXN10Q9UBB4 475 aa15□□□□□ -0.01
CHD4-201ENST00000357008 DPEP1P16444 411 aa15□□□□□ -0.01
CHD4-201ENST00000357008 TFEBP19484 476 aa15□□□□□ -0.01
CHD4-201ENST00000357008 PBX1P40424 430 aa15□□□□□ -0.01
CHD4-201ENST00000357008 OFCC1Q8IZS5 231 aa15□□□□□ -0.01
CHD4-201ENST00000357008 LGI2Q8N0V4 545 aa15□□□□□ -0.01
CHD4-201ENST00000357008 ZNF671Q8TAW3 534 aa15□□□□□ -0.01
CHD4-201ENST00000357008 MYLPFQ96A32 169 aa15□□□□□ -0.01
CHD4-201ENST00000357008 PWWP2AQ96N64 755 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms