RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 SEC24DO94855 1032 aaPredicted RBP13.49□□□□□ -0.25
CASC4-202ENST00000345795 SORBS2O94875 1100 aaKnown RBP13.49□□□□□ -0.25
CASC4-202ENST00000345795 RHOCP08134 193 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 GLDCP23378 1020 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 CDK16Q00536 496 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 MAPRE1Q15691 268 aaKnown RBP13.49□□□□□ -0.25
CASC4-202ENST00000345795 NFE2Q16621 373 aaPredicted RBP13.49□□□□□ -0.25
CASC4-202ENST00000345795 ACAD11Q709F0 780 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 TMEM173Q86WV6 379 aaPredicted RBP13.49□□□□□ -0.25
CASC4-202ENST00000345795 SNX32Q86XE0 403 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 ZNF366Q8N895 744 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 MAB21L3Q8N8X9 362 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 OR13C4Q8NGS5 318 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 SLC45A3Q96JT2 553 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 NFKBIZQ9BYH8 718 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 TRIM8Q9BZR9 551 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 SEMA4BQ9NPR2 832 aaPredicted RBP13.49□□□□□ -0.25
CASC4-202ENST00000345795 NELFEP18615 380 aaKnown RBP13.49□□□□□ -0.25
CASC4-202ENST00000345795 FKBP1BP68106 108 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 GRIK3Q13003 919 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 RBM20Q5T481 1227 aaKnown RBP13.49□□□□□ -0.25
CASC4-202ENST00000345795 SLC9A4Q6AI14 798 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 FRA10AC1Q70Z53 315 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 TEKT4Q8WW24 435 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 HIPK3Q9H422 1215 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 POMKQ9H5K3 350 aa13.49□□□□□ -0.25
CASC4-202ENST00000345795 DENND2DQ9H6A0 471 aaPredicted RBP13.49□□□□□ -0.25
CASC4-202ENST00000345795 NKX1-2Q9UD57 310 aaPredicted RBP13.49□□□□□ -0.25
CASC4-202ENST00000345795 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 B4GALT3O60512 393 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 SERPINB8P50452 374 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 ZNF177Q13360 481 aaPredicted RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 DDX39BQ13838 428 aaKnown RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 VEPH1Q14D04 833 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 RBBP7Q16576 425 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 PITRM1Q5JRX3 1037 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 DRICH1Q6PGQ1 229 aaPredicted RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 DET1Q7L5Y6 550 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 RBM15BQ8NDT2 890 aaKnown RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 PIWIL2Q8TC59 973 aaKnown RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 ILKAPQ9H0C8 392 aaPredicted RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 RGS18Q9NS28 235 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 FBXO5Q9UKT4 447 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 PCDHB9Q9Y5E1 797 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 WASF2Q9Y6W5 498 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 ENO4A6NNW6 628 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 I6L893 689 aaPredicted RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 ALDOAP04075 364 aaKnown RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 WARSP23381 471 aaKnown RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 GABRB2P47870 512 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 CREB5Q02930 508 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 MORN1Q5T089 497 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 GPR158Q5T848 1215 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 C6orf89Q6UWU4 347 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 LRRC43Q8N309 656 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 ATP6V0D2Q8N8Y2 350 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 GRIN3AQ8TCU5 1115 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 SERPINB11Q96P15 392 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 TMEM39AQ9NV64 488 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 LGALS13Q9UHV8 139 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 STARD13Q9Y3M8 1113 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 A0A0C4DFX4 3053 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 TYROBPO43914 113 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 PEX1O43933 1283 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 SRP72O76094 671 aaKnown RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 COPAP53621 1224 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 TAS2R39P59534 338 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 KHDC1Q4VXA5 237 aaKnown RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 PPM1LQ5SGD2 360 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 C6orf10Q5SRN2 563 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 ATXN7L2Q5T6C5 722 aaPredicted RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 LRRC8EQ6NSJ5 796 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 LRRC8DQ7L1W4 858 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 HS6ST3Q8IZP7 471 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 TLR8Q9NR97 1041 aaKnown RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 ADAM28Q9UKQ2 775 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 AAR2Q9Y312 384 aaKnown RBP13.48□□□□□ -0.25
CASC4-202ENST00000345795 HS3ST4Q9Y661 456 aa13.48□□□□□ -0.25
CASC4-202ENST00000345795 STX7O15400 261 aaKnown RBP13.47□□□□□ -0.25
CASC4-202ENST00000345795 SNX2O60749 519 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 XPAP23025 273 aaPredicted RBP13.47□□□□□ -0.25
CASC4-202ENST00000345795 POLE2P56282 527 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 SMAD3P84022 425 aaKnown RBP13.47□□□□□ -0.25
CASC4-202ENST00000345795 DCLRE1AQ6PJP8 1040 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 RNF19BQ6ZMZ0 732 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 TAS1R1Q7RTX1 841 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 MIER2Q8N344 545 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 DNAJC1Q96KC8 554 aaKnown RBP13.47□□□□□ -0.25
CASC4-202ENST00000345795 C20orf27Q9GZN8 174 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 TNKS2Q9H2K2 1166 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 MTF2Q9Y483 593 aaPredicted RBP13.47□□□□□ -0.25
CASC4-202ENST00000345795 IQCF5A8MTL0 148 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 SNAP91O60641 907 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 FYNP06241 537 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 BPGMP07738 259 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 KCNE1P15382 129 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 CD151P48509 253 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 BNIP1Q12981 228 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 ZNF789Q5FWF6 425 aa13.47□□□□□ -0.25
CASC4-202ENST00000345795 FBXL22Q6P050 247 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms