RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 TKTL2Q9H0I9 626 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 OSBPL2Q9H1P3 480 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 EPB41L4BQ9H329 900 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 CDC42EP4Q9H3Q1 356 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 MAGED2Q9UNF1 606 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 INVSQ9Y283 1065 aa13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 FARP1Q9Y4F1 1045 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-202ENST00000344114 ANKRD36A6QL64 1941 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 MYLKQ15746 1914 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 AKAP13Q12802 2813 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 PPP1R12AO14974 1030 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 KCNN4O15554 427 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 MFSD11O43934 449 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 YWHAQP27348 245 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 IFNAR2P48551 515 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 GBE1Q04446 702 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 ZNF844Q08AG5 666 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 IFFO1Q0D2I5 559 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 DEFB124Q8NES8 71 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 ZCCHC14Q8WYQ9 949 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 PRCCQ92733 491 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 FBXO32Q969P5 355 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 SLC22A12Q96S37 553 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 NMUR1Q9HB89 426 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 USP29Q9HBJ7 922 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 TLR8Q9NR97 1041 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 TMPRSS4Q9NRS4 437 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 CLIC5Q9NZA1 410 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 DTLQ9NZJ0 730 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 VPS18Q9P253 973 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 MMP17Q9ULZ9 603 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 NEUROG3Q9Y4Z2 214 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 WNT6Q9Y6F9 365 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 CEP192Q8TEP8 1941 aa13.79□□□□□ -0.2
HERPUD1-202ENST00000344114 ZFYVE26Q68DK2 2539 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 GOLGA6CA6NDK9 693 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 HMGB1P1B2RPK0 211 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 K7EQS6 105 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 POLR3GO15318 223 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 EIF3HO15372 352 aaKnown RBP eCLIP13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 MYZAPP0CAP1 466 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 GOLGA6DP0CG33 693 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 RBL1P28749 1068 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 CCR1P32246 355 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 SERPINB6P35237 376 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 OPRD1P41143 372 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 NR1H3Q13133 447 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 PDK1Q15118 436 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 SDHAF4Q5VUM1 108 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 PPP1R21Q6ZMI0 780 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 MDGA1Q8NFP4 955 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 TFB1MQ8WVM0 346 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 CPT1BQ92523 772 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 TTC25Q96NG3 672 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 HAPLN3Q96S86 360 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 CYP2S1Q96SQ9 504 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 TMEM109Q9BVC6 243 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 TTLL2Q9BWV7 592 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 FRMD8Q9BZ67 464 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 MAGEB5Q9BZ81 275 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 C10orf88Q9H8K7 445 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 TMBIM4Q9HC24 238 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 ETNK2Q9NVF9 386 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 GOLGA6AQ9NYA3 693 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 GMIPQ9P107 970 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 PCNX2A6NKB5 2137 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 PI4KAP42356 2102 aa13.78□□□□□ -0.2
HERPUD1-202ENST00000344114 PKD1L2Q7Z442 2459 aa13.77□□□□□ -0.2
HERPUD1-202ENST00000344114 TRAV19A0A0A6YYK7 116 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 I6L893 689 aaPredicted RBP13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 TTC4O95801 387 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 SLC2A3P11169 496 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 ERCC2P18074 760 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 DHPSP49366 369 aaPredicted RBP13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 USP46P62068 366 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 NRG1Q02297 640 aaPredicted RBP13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 RING1Q06587 406 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 LMAN2Q12907 356 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 SLC10A2Q12908 348 aaPredicted RBP13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 SLC29A2Q14542 456 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 PRKD1Q15139 912 aaPredicted RBP13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 GAB4Q2WGN9 574 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 TTMPQ5BVD1 217 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 AGBL2Q5U5Z8 902 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 ANO7Q6IWH7 933 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 CENPUQ71F23 418 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 NAT8LQ8N9F0 302 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 OVCA2Q8WZ82 227 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 ATP6V1G3Q96LB4 118 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 CDK5RAP1Q96SZ6 601 aaKnown RBP13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 RBM15Q96T37 977 aaKnown RBP eCLIP13.77□□□□□ -0.212e-8■■■■□ 24.1
HERPUD1-202ENST00000344114 KLC2Q9H0B6 622 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 BRD8Q9H0E9 1235 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 TRPC7Q9HCX4 862 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 ANLNQ9NQW6 1124 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 OR12D3Q9UGF7 316 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 TLR6Q9Y2C9 796 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 MSRB2Q9Y3D2 182 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 ADAMTS9Q9P2N4 1935 aa13.77□□□□□ -0.21
HERPUD1-202ENST00000344114 ANTXRLA6NF34 631 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms