RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 DEPDC5O75140 1603 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 GJB1P08034 283 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 PIRTP0C851 137 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 MMP8P22894 467 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 ATP5C1P36542 298 aaKnown RBP12.63□□□□□ -0.39
OTOF-203ENST00000339598 VGLL4Q14135 290 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 UBAP2LQ14157 1087 aaKnown RBP12.63□□□□□ -0.39
OTOF-203ENST00000339598 UGCGQ16739 394 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 STXBP5Q5T5C0 1151 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 CXCL17Q6UXB2 119 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 CDK20Q8IZL9 346 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 ZNF276Q8N554 614 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 NKAPQ8N5F7 415 aaKnown RBP12.63□□□□□ -0.39
OTOF-203ENST00000339598 DEPDC7Q96QD5 511 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 SEMA3CQ99985 751 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 REEP1Q9H902 201 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 CLIC5Q9NZA1 410 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 RAP2CQ9Y3L5 183 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 C2CD2Q9Y426 696 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 AGLP35573 1532 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 FAM25AB3EWG3 89 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 FAM25CB3EWG5 89 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 FAM25GB3EWG6 89 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 CATP04040 527 aaKnown RBP12.63□□□□□ -0.39
OTOF-203ENST00000339598 FEN1P39748 380 aaKnown RBP12.63□□□□□ -0.39
OTOF-203ENST00000339598 ST13P50502 369 aaKnown RBP12.63□□□□□ -0.39
OTOF-203ENST00000339598 CLCN5P51795 746 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 BTG3Q14201 252 aaPredicted RBP12.63□□□□□ -0.39
OTOF-203ENST00000339598 FAM187BQ17R55 369 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 SCIMPQ6UWF3 145 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 CMC1Q7Z7K0 106 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 LRRC4CQ9HCJ2 640 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 NRCAMQ92823 1304 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 HGFP14210 728 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 NOS3P29474 1203 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 ZIK1Q3SY52 487 aaPredicted RBP12.63□□□□□ -0.39
OTOF-203ENST00000339598 GJC2Q5T442 439 aaPredicted RBP12.63□□□□□ -0.39
OTOF-203ENST00000339598 EPHX4Q8IUS5 362 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 ADHFE1Q8IWW8 467 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.63□□□□□ -0.39
OTOF-203ENST00000339598 R3HDM2Q9Y2K5 976 aaKnown RBP12.63□□□□□ -0.39
OTOF-203ENST00000339598 RIC1Q4ADV7 1423 aa12.63□□□□□ -0.39
OTOF-203ENST00000339598 YDJCA8MPS7 323 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 IRF6O14896 467 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 CKBP12277 381 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 RTP1P59025 263 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 QPCTQ16769 361 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 HYIQ5T013 277 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 TTC23Q5W5X9 447 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 DHDDSQ86SQ9 333 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 CYP4Z2PQ8N1L4 340 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 C2orf49Q9BVC5 232 aaPredicted RBP12.62□□□□□ -0.39
OTOF-203ENST00000339598 ASB8Q9H765 288 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 ARHGAP28Q9P2N2 729 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 SLC17A7Q9P2U7 560 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 PQBP1O60828 265 aaKnown RBP12.62□□□□□ -0.39
OTOF-203ENST00000339598 HNRNPLP14866 589 aaKnown RBP eCLIP12.62□□□□□ -0.39
OTOF-203ENST00000339598 DGKAP23743 735 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 CHN2P52757 468 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 GRIK3Q13003 919 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 DCTN2Q13561 401 aaKnown RBP12.62□□□□□ -0.39
OTOF-203ENST00000339598 MAPKAPK3Q16644 382 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 ATAD3BQ5T9A4 648 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 CACUL1Q86Y37 369 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 OR52K2Q8NGK3 314 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 RCN3Q96D15 328 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 MTFMTQ96DP5 389 aaKnown RBP12.62□□□□□ -0.39
OTOF-203ENST00000339598 MFSD14AQ96MC6 490 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 PHACTR1Q9C0D0 580 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 REXO4Q9GZR2 422 aaKnown RBP12.62□□□□□ -0.39
OTOF-203ENST00000339598 RPS6KB2Q9UBS0 482 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 ENOPH1Q9UHY7 261 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 TDRKHQ9Y2W6 561 aaKnown RBP12.62□□□□□ -0.39
OTOF-203ENST00000339598 PCDHB12Q9Y5F1 795 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 ANXA5P08758 320 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 ANPEPP15144 967 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 ALOX12P18054 663 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 PAICSP22234 425 aaKnown RBP12.62□□□□□ -0.39
OTOF-203ENST00000339598 MATKP42679 507 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 CDH13P55290 713 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 USP4Q13107 963 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 TTC27Q6P3X3 843 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 SPATA6LQ8N4H0 392 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 PTCD3Q96EY7 689 aaKnown RBP12.62□□□□□ -0.39
OTOF-203ENST00000339598 TINF2Q9BSI4 451 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 TM6SF2Q9BZW4 377 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 STN1Q9H668 368 aaKnown RBP12.62□□□□□ -0.39
OTOF-203ENST00000339598 PRKAG3Q9UGI9 489 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 KPNA4O00629 521 aaPredicted RBP12.62□□□□□ -0.39
OTOF-203ENST00000339598 CD3EAPO15446 510 aaKnown RBP12.62□□□□□ -0.39
OTOF-203ENST00000339598 EPN2O95208 641 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 SERPINA4P29622 427 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 RAB10P61026 200 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 MAXP61244 160 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 POLR2LP62875 67 aaKnown RBP12.62□□□□□ -0.39
OTOF-203ENST00000339598 SLC9A5Q14940 896 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 PHKG1Q16816 387 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 PTPN20Q4JDL3 420 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 SPESP1Q6UW49 350 aa12.62□□□□□ -0.39
OTOF-203ENST00000339598 RD3Q7Z3Z2 195 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms