RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ZNF180Q9UJW8 692 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 IRAK3Q9Y616 596 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 OBSL1O75147 1896 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 TSPAN3O60637 253 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 POLBP06746 335 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 MAXP61244 160 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 CCDC15Q0P6D6 951 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 RGS9BPQ6ZS82 235 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 CCDC149Q6ZUS6 474 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 SPRED2Q7Z698 418 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 TMC8Q8IU68 726 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 MRPL43Q8N983 215 aaKnown RBP20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 SPPL3Q8TCT6 385 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 ADAMTS19Q8TE59 1207 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 TBL1YQ9BQ87 522 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 EMILIN2Q9BXX0 1053 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 PITPNM3Q9BZ71 974 aa20.59■□□□□ 0.89
RIPPLY3-201ENST00000329553 C2orf71A6NGG8 1288 aa20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 SCAMP3O14828 347 aaKnown RBP20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 PMPCBO75439 489 aa20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 OLFM2O95897 454 aa20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 ADRA1AP35348 466 aa20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 CYP4F8P98187 520 aa20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 ASRGL1Q7L266 308 aa20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 TMEM135Q86UB9 458 aa20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 POF1BQ8WVV4 589 aa20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 KLF6Q99612 283 aaPredicted RBP20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 FICDQ9BVA6 458 aa20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 SLC25A51Q9H1U9 297 aa20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 RETREG1Q9H6L5 497 aa20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 ARHGEF3Q9NR81 526 aa20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 SMG5Q9UPR3 1016 aaKnown RBP20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 LZTS1Q9Y250 596 aa20.58■□□□□ 0.89
RIPPLY3-201ENST00000329553 CHD5Q8TDI0 1954 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 TYROBPO43914 113 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 PRAMEF11O60813 436 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 GNA12Q03113 381 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 NIPAL4Q0D2K0 466 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 TTC39BQ5VTQ0 682 aaPredicted RBP20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 DENND5AQ6IQ26 1287 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 OR7D4Q8NG98 312 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 SLC22A17Q8WUG5 538 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 NSMCE1Q8WV22 266 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 SERAC1Q96JX3 654 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 MRGPRX2Q96LB1 330 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 PPP1R2P1Q96PQ5 205 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 C17orf80Q9BSJ5 609 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 IL22Q9GZX6 179 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 IL1RAPL1Q9NZN1 696 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 BAIAP2L1Q9UHR4 511 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 STARD13Q9Y3M8 1113 aa20.58■□□□□ 0.88
RIPPLY3-201ENST00000329553 LINC01553A4QN01 128 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 GOLGA8RI6L899 631 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 NRG2O14511 850 aaPredicted RBP20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 GREM1O60565 184 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 CLDN11O75508 207 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 MT-ND3P03897 115 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 ALADP13716 330 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 ETFBP38117 255 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 ITKQ08881 620 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 SPANXN3Q5MJ09 141 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 PGBD5Q8N414 524 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 IMP4Q96G21 291 aaKnown RBP20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 MAGEH1Q9H213 219 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 CHRAC1Q9NRG0 131 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 SLC17A6Q9P2U8 582 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 MCM8Q9UJA3 840 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 STOML2Q9UJZ1 356 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 CPQQ9Y646 472 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 AP3B1O00203 1094 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 GLUD1P00367 558 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 RPA3P35244 121 aaPredicted RBP20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 SKIV2L2P42285 1042 aaKnown RBP20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 TNK2Q07912 1038 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 IHHQ14623 411 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 ANKRD20A4Q4UJ75 823 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 KDELC2Q7Z4H8 507 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 MAB21L3Q8N8X9 362 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 ZNF669Q96BR6 464 aaPredicted RBP20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 MFSD3Q96ES6 412 aa20.57■□□□□ 0.88
RIPPLY3-201ENST00000329553 MAGEB16A2A368 324 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 TTC24A2A3L6 582 aaPredicted RBP20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 TRIM49D1C9J1S8 452 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 USP1O94782 785 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 ARHGEF15O94989 841 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 SNRPAP09012 282 aaKnown RBP20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 ERVK-10P10266 1014 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 GJA1P17302 382 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 DSC2Q02487 901 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 LBRQ14739 615 aaKnown RBP20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 SMAD1Q15797 465 aaKnown RBP20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 KDELC1Q6UW63 502 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 RANBP10Q6VN20 620 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 SH2D5Q6ZV89 423 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 MRPS31Q92665 395 aaKnown RBP20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 KLHL29Q96CT2 875 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 ATXN3LQ9H3M9 355 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 PDFQ9HBH1 243 aa20.56■□□□□ 0.88
RIPPLY3-201ENST00000329553 SSU72Q9NP77 194 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms