RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 OR2T34Q8NGX1 318 aa25.59■■□□□ 1.69
PDF-201ENST00000288022 CASKIN2Q8WXE0 1202 aa25.59■■□□□ 1.69
PDF-201ENST00000288022 BIRC7Q96CA5 298 aa25.59■■□□□ 1.69
PDF-201ENST00000288022 RMDN1Q96DB5 314 aa25.59■■□□□ 1.69
PDF-201ENST00000288022 ZDHHC6Q9H6R6 413 aa25.59■■□□□ 1.69
PDF-201ENST00000288022 SLC6A14Q9UN76 642 aa25.59■■□□□ 1.69
PDF-201ENST00000288022 LEFTY1O75610 366 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 SERPINF2P08697 491 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 SDHBP21912 280 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 MAN1A1P33908 653 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 ID4P47928 161 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 ADPRHP54922 357 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 TAS2R40P59535 323 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 RHOAP61586 193 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 SNRPD1P62314 119 aaKnown RBP25.58■■□□□ 1.69
PDF-201ENST00000288022 LZTR1Q8N653 840 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 KCTD6Q8NC69 237 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 OR2AP1Q8NGE2 309 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 OR6K2Q8NGY2 324 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 PPP1R16AQ96I34 528 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 LUC7LQ9NQ29 371 aaKnown RBP25.58■■□□□ 1.69
PDF-201ENST00000288022 KLHL11Q9NVR0 708 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 UBA2Q9UBT2 640 aaPredicted RBP25.58■■□□□ 1.69
PDF-201ENST00000288022 WDR87Q6ZQQ6 2873 aa25.58■■□□□ 1.69
PDF-201ENST00000288022 NUMA1Q14980 2115 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 TBC1D3DA0A087WVF3 549 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 TBC1D3IA0A087WXS9 549 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 TBC1D3EA0A087X179 549 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 TBC1D3KA0A087X1G2 549 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 TBC1D3FA6NER0 549 aaPredicted RBP25.57■■□□□ 1.68
PDF-201ENST00000288022 TBC1D3LB9A6J9 549 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 J3KR12 359 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 SLC7A4O43246 635 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 GSRP00390 522 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 KRT7P08729 469 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 TBC1D3HP0C7X1 549 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 ARHGAP25P42331 645 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 CCDC15Q0P6D6 951 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 ATP13A4Q4VNC1 1196 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 INO80DQ53TQ3 878 aaPredicted RBP25.57■■□□□ 1.68
PDF-201ENST00000288022 TBC1D3GQ6DHY5 549 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 TBC1D3CQ6IPX1 549 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 TMTC1Q8IUR5 882 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 ARHGAP12Q8IWW6 846 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 TBC1D3Q8IZP1 549 aaPredicted RBP25.57■■□□□ 1.68
PDF-201ENST00000288022 SPC24Q8NBT2 197 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 ARRDC3Q96B67 414 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 CALN1Q9BXU9 219 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 SP110Q9HB58 689 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 FSCN3Q9NQT6 498 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 MFHAS1Q9Y4C4 1052 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 WASF2Q9Y6W5 498 aa25.57■■□□□ 1.68
PDF-201ENST00000288022 A0A1B0GTW7 788 aa25.56■■□□□ 1.68
PDF-201ENST00000288022 SOWAHDA6NJG2 315 aa25.56■■□□□ 1.68
PDF-201ENST00000288022 KRIT1O00522 736 aa25.56■■□□□ 1.68
PDF-201ENST00000288022 PRAMEF11O60813 436 aa25.56■■□□□ 1.68
PDF-201ENST00000288022 MTA2O94776 668 aa25.56■■□□□ 1.68
PDF-201ENST00000288022 CDC25BP30305 580 aa25.56■■□□□ 1.68
PDF-201ENST00000288022 NOP2P46087 812 aaKnown RBP25.56■■□□□ 1.68
PDF-201ENST00000288022 ATXN7L2Q5T6C5 722 aaPredicted RBP25.56■■□□□ 1.68
PDF-201ENST00000288022 AGBL4Q5VU57 503 aa25.56■■□□□ 1.68
PDF-201ENST00000288022 AFMIDQ63HM1 303 aa25.56■■□□□ 1.68
PDF-201ENST00000288022 PLPP6Q8IY26 295 aa25.56■■□□□ 1.68
PDF-201ENST00000288022 GDAP1L1Q96MZ0 367 aa25.56■■□□□ 1.68
PDF-201ENST00000288022 ETNK2Q9NVF9 386 aa25.56■■□□□ 1.68
PDF-201ENST00000288022 RCOR3Q9P2K3 495 aaPredicted RBP25.56■■□□□ 1.68
PDF-201ENST00000288022 PCDHA13Q9Y5I0 950 aa25.56■■□□□ 1.68
PDF-201ENST00000288022 RNF103O00237 685 aa25.55■■□□□ 1.68
PDF-201ENST00000288022 BCAT2O15382 392 aaPredicted RBP25.55■■□□□ 1.68
PDF-201ENST00000288022 PLRG1O43660 514 aaKnown RBP25.55■■□□□ 1.68
PDF-201ENST00000288022 IPO7O95373 1038 aaKnown RBP25.55■■□□□ 1.68
PDF-201ENST00000288022 LCA5LO95447 670 aa25.55■■□□□ 1.68
PDF-201ENST00000288022 IGSF6O95976 241 aa25.55■■□□□ 1.68
PDF-201ENST00000288022 CD48P09326 243 aa25.55■■□□□ 1.68
PDF-201ENST00000288022 ENGP17813 658 aa25.55■■□□□ 1.68
PDF-201ENST00000288022 GKP32189 559 aa25.55■■□□□ 1.68
PDF-201ENST00000288022 MAPK8P45983 427 aa25.55■■□□□ 1.68
PDF-201ENST00000288022 ATXN3P54252 364 aaPredicted RBP25.55■■□□□ 1.68
PDF-201ENST00000288022 MMRN1Q13201 1228 aa25.55■■□□□ 1.68
PDF-201ENST00000288022 STPG1Q5TH74 334 aa25.55■■□□□ 1.68
PDF-201ENST00000288022 TSC1Q92574 1164 aa25.55■■□□□ 1.68
PDF-201ENST00000288022 GTPBP2Q9BX10 602 aaKnown RBP25.55■■□□□ 1.68
PDF-201ENST00000288022 PDFQ9HBH1 243 aa25.55■■□□□ 1.68
PDF-201ENST00000288022 POP4O95707 220 aaKnown RBP25.54■■□□□ 1.68
PDF-201ENST00000288022 IGHV4-34P06331 123 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 CD27P26842 260 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 SERPINB6P35237 376 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 RAD51Q06609 339 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 DPYSL3Q14195 570 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 PDK2Q15119 407 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 CYTH1Q15438 398 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 MYLK3Q32MK0 819 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 ARHGAP36Q6ZRI8 547 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 ERN2Q76MJ5 926 aaKnown RBP25.54■■□□□ 1.68
PDF-201ENST00000288022 MAP7D3Q8IWC1 876 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 TP53INP2Q8IXH6 220 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 FAM71BQ8TC56 605 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 FAM131CQ96AQ9 280 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 KDM4CQ9H3R0 1056 aa25.54■■□□□ 1.68
PDF-201ENST00000288022 CAPN10Q9HC96 672 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms