RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 CHKBQ9Y259 395 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 PLLPQ9Y342 182 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 STARD13Q9Y3M8 1113 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 NUP205Q92621 2012 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 HEATR9A2RTY3 570 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 FCHO1O14526 889 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 C2P06681 752 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 GALTP07902 379 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 FAM163BP0C2L3 166 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 PAX3P23760 479 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 CORO1AP31146 461 aaKnown RBP9.12□□□□□ -0.95
SEC16A-201ENST00000277537 MLLT6P55198 1093 aaPredicted RBP9.12□□□□□ -0.95
SEC16A-201ENST00000277537 MPP1Q00013 466 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 PAFAH1B3Q15102 231 aaKnown RBP9.12□□□□□ -0.95
SEC16A-201ENST00000277537 C1orf146Q5VVC0 180 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 MRNIPQ6NTE8 343 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 C10orf107Q8IVU9 208 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 REM2Q8IYK8 340 aaPredicted RBP9.12□□□□□ -0.95
SEC16A-201ENST00000277537 MAB21L3Q8N8X9 362 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 NSL1Q96IY1 281 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 PPP1R2P1Q96PQ5 205 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 SUDS3Q9H7L9 328 aaPredicted RBP9.12□□□□□ -0.95
SEC16A-201ENST00000277537 WDR6Q9NNW5 1121 aaKnown RBP9.12□□□□□ -0.95
SEC16A-201ENST00000277537 MTMR11A4FU01 709 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 TXNDC9O14530 226 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 MATN3O15232 486 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 SNX2O60749 519 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 GLP2RO95838 553 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 FYNP06241 537 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 CCNCP24863 283 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 ZNF460Q14592 562 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 KIF19Q2TAC6 998 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 ALFQ53S48 1182 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 RTN4RL1Q86UN2 441 aaPredicted RBP9.12□□□□□ -0.95
SEC16A-201ENST00000277537 DDIASQ8IXT1 998 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 KLHDC9Q8NEP7 349 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 CYP2S1Q96SQ9 504 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 TTC1Q99614 292 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 CORO1BQ9BR76 489 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 ILKAPQ9H0C8 392 aaPredicted RBP9.12□□□□□ -0.95
SEC16A-201ENST00000277537 MAN1C1Q9NR34 630 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 IGSF9Q9P2J2 1179 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 FBXO5Q9UKT4 447 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 FAM50BQ9Y247 325 aa9.12□□□□□ -0.95
SEC16A-201ENST00000277537 C2orf81A6NN90 581 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 SLC38A8A6NNN8 435 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 AIM2O14862 343 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 CLGNO14967 610 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 DCLK1O15075 740 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 HLA-DQB2P05538 268 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 TACR2P21452 398 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 GABRR2P28476 465 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 XKR4Q5GH76 650 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 FSTL4Q6MZW2 842 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 FRA10AC1Q70Z53 315 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 RELL1Q8IUW5 271 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 COLGALT2Q8IYK4 626 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 HAPLN3Q96S86 360 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 THAP1Q9NVV9 213 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.11□□□□□ -0.951e-6■■□□□ 12.4
SEC16A-201ENST00000277537 TRIM13O60858 407 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 TBL1XO60907 577 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 SRP72O76094 671 aaKnown RBP9.11□□□□□ -0.95
SEC16A-201ENST00000277537 RHOQP17081 205 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 GJA1P17302 382 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 ITGB6P18564 788 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 ACVRL1P37023 503 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 ABL2P42684 1182 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 STX1BP61266 288 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 FSCBQ5H9T9 825 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.11□□□□□ -0.951e-11■■■■□ 21.6
SEC16A-201ENST00000277537 ALYREFQ86V81 257 aaKnown RBP9.11□□□□□ -0.95
SEC16A-201ENST00000277537 TSPAN17Q96FV3 270 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 UPF3AQ9H1J1 476 aaKnown RBP9.11□□□□□ -0.95
SEC16A-201ENST00000277537 SMOC2Q9H3U7 446 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 L3MBTL1Q9Y468 752 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 ZFP37Q9Y6Q3 630 aaPredicted RBP9.11□□□□□ -0.95
SEC16A-201ENST00000277537 TP73O15350 636 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 SERPINE1P05121 402 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 PRKCGP05129 697 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 TSPAN8P19075 237 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 SERPINB5P36952 375 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 USP4Q13107 963 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 DPYSQ14117 519 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 LBRQ14739 615 aaKnown RBP9.11□□□□□ -0.95
SEC16A-201ENST00000277537 GRM3Q14832 879 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 ZNF697Q5TEC3 545 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 PKN3Q6P5Z2 889 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 KYAT3Q6YP21 454 aaKnown RBP9.11□□□□□ -0.95
SEC16A-201ENST00000277537 CDHR3Q6ZTQ4 885 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 CYP4V2Q6ZWL3 525 aaPredicted RBP9.11□□□□□ -0.95
SEC16A-201ENST00000277537 PIGWQ7Z7B1 504 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 MFN1Q8IWA4 741 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 PNPLA1Q8N8W4 532 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 PXYLP1Q8TE99 480 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 OXNAD1Q96HP4 312 aaPredicted RBP9.11□□□□□ -0.95
SEC16A-201ENST00000277537 ZNF778Q96MU6 729 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 EGFL8Q99944 293 aa9.11□□□□□ -0.95
SEC16A-201ENST00000277537 TSEN34Q9BSV6 310 aaKnown RBP9.11□□□□□ -0.95
SEC16A-201ENST00000277537 TMEM216Q9P0N5 145 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms