RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 LRRC19Q9H756 370 aa23.38■■□□□ 1.33
LSM4-201ENST00000252816 ANAPC7Q9UJX3 599 aa23.38■■□□□ 1.33
LSM4-201ENST00000252816 LATO43561 262 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 BUB1O43683 1085 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 MAPK8IP2Q13387 824 aaPredicted RBP23.37■■□□□ 1.33
LSM4-201ENST00000252816 SERINC3Q13530 473 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 PIGHQ14442 188 aaPredicted RBP23.37■■□□□ 1.33
LSM4-201ENST00000252816 KIF19Q2TAC6 998 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 PARP15Q460N3 678 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 PPP6R3Q5H9R7 873 aaPredicted RBP23.37■■□□□ 1.33
LSM4-201ENST00000252816 KCNT1Q5JUK3 1230 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 TXNRD3NBQ6F5E7 133 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 PSAPL1Q6NUJ1 521 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 RFX8Q6ZV50 586 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 PLPP6Q8IY26 295 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 NETO2Q8NC67 525 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 OR6K2Q8NGY2 324 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 VOPP1Q96AW1 172 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 CELF6Q96J87 481 aaKnown RBP23.37■■□□□ 1.33
LSM4-201ENST00000252816 NCAPGQ9BPX3 1015 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 HEPHQ9BQS7 1158 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 IL21RQ9HBE5 538 aa23.37■■□□□ 1.33
LSM4-201ENST00000252816 ZSCAN5CA6NGD5 496 aaPredicted RBP23.36■■□□□ 1.33
LSM4-201ENST00000252816 WNT9AO14904 365 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 MFAP3LO75121 409 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 TMCC1O94876 653 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 CD59P13987 128 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 CSRP1P21291 193 aaKnown RBP23.36■■□□□ 1.33
LSM4-201ENST00000252816 GKP32189 559 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 GRIA4P48058 902 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 NOVA1P51513 510 aaKnown RBP23.36■■□□□ 1.33
LSM4-201ENST00000252816 ADKP55263 362 aaKnown RBP23.36■■□□□ 1.33
LSM4-201ENST00000252816 TEAD4Q15561 434 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 SLC18A3Q16572 532 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 SMTNL2Q2TAL5 461 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 PIP4P1Q86T03 277 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 NIPA2Q8N8Q9 360 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 DEFB124Q8NES8 71 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 CHP1Q99653 195 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 PACSIN1Q9BY11 444 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 ABHD10Q9NUJ1 306 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 CWC15Q9P013 229 aaKnown RBP23.36■■□□□ 1.33
LSM4-201ENST00000252816 IP6K2Q9UHH9 426 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 ANKRD6Q9Y2G4 727 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 SNX11Q9Y5W9 270 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 PLXNA2O75051 1894 aa23.36■■□□□ 1.33
LSM4-201ENST00000252816 GSRP00390 522 aa23.35■■□□□ 1.33
LSM4-201ENST00000252816 ERCC2P18074 760 aa23.35■■□□□ 1.33
LSM4-201ENST00000252816 MAT2AP31153 395 aaKnown RBP23.35■■□□□ 1.33
LSM4-201ENST00000252816 NDST2P52849 883 aa23.35■■□□□ 1.33
LSM4-201ENST00000252816 RACK1P63244 317 aaKnown RBP23.35■■□□□ 1.33
LSM4-201ENST00000252816 HLA-BQ31612 363 aa23.35■■□□□ 1.33
LSM4-201ENST00000252816 ATXN7L2Q5T6C5 722 aaPredicted RBP23.35■■□□□ 1.33
LSM4-201ENST00000252816 SARM1Q6SZW1 724 aa23.35■■□□□ 1.33
LSM4-201ENST00000252816 ERN2Q76MJ5 926 aaKnown RBP23.35■■□□□ 1.33
LSM4-201ENST00000252816 HDAC8Q9BY41 377 aa23.35■■□□□ 1.33
LSM4-201ENST00000252816 SLC39A8Q9C0K1 460 aa23.35■■□□□ 1.33
LSM4-201ENST00000252816 ZDHHC6Q9H6R6 413 aa23.35■■□□□ 1.33
LSM4-201ENST00000252816 GAREM1Q9H706 876 aa23.35■■□□□ 1.33
LSM4-201ENST00000252816 ZWILCHQ9H900 591 aa23.35■■□□□ 1.33
LSM4-201ENST00000252816 DYRK4Q9NR20 520 aa23.35■■□□□ 1.33
LSM4-201ENST00000252816 SSU72P8A0A1W2PR75 194 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 UPK3BL1B0FP48 263 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 UPK3BL2E5RIL1 263 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 DAPK3O43293 454 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 WNT1P04628 370 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 ADRB1P08588 477 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 TPM1P09493 284 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 RARAP10276 462 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 HCAR3P49019 387 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 SLC25A11Q02978 314 aaKnown RBP23.34■■□□□ 1.33
LSM4-201ENST00000252816 TBX2Q13207 712 aaPredicted RBP23.34■■□□□ 1.33
LSM4-201ENST00000252816 DPYSQ14117 519 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 DPYSL2Q16555 572 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 BOLA3Q53S33 107 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 N4BP2L1Q5TBK1 243 aaPredicted RBP23.34■■□□□ 1.33
LSM4-201ENST00000252816 AFMIDQ63HM1 303 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 IL27RAQ6UWB1 636 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 TRIM69Q86WT6 500 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 ARHGAP12Q8IWW6 846 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 RYBPQ8N488 228 aaPredicted RBP23.34■■□□□ 1.33
LSM4-201ENST00000252816 NPWQ8N729 165 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 OR2AP1Q8NGE2 309 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 ZNF564Q8TBZ8 553 aaPredicted RBP23.34■■□□□ 1.33
LSM4-201ENST00000252816 HSPH1Q92598 858 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 PREBQ9HCU5 417 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 ZNHIT6Q9NWK9 470 aaKnown RBP23.34■■□□□ 1.33
LSM4-201ENST00000252816 DONSONQ9NYP3 566 aa23.34■■□□□ 1.33
LSM4-201ENST00000252816 FNDC3AQ9Y2H6 1198 aaKnown RBP23.34■■□□□ 1.33
LSM4-201ENST00000252816 J3KR12 359 aa23.33■■□□□ 1.33
LSM4-201ENST00000252816 MYO1FO00160 1098 aa23.33■■□□□ 1.33
LSM4-201ENST00000252816 ITGB7P26010 798 aa23.33■■□□□ 1.33
LSM4-201ENST00000252816 ZNF135P52742 658 aaPredicted RBP23.33■■□□□ 1.33
LSM4-201ENST00000252816 SNRPD1P62314 119 aaKnown RBP23.33■■□□□ 1.33
LSM4-201ENST00000252816 MYLK3Q32MK0 819 aa23.33■■□□□ 1.33
LSM4-201ENST00000252816 INO80DQ53TQ3 878 aaPredicted RBP23.33■■□□□ 1.33
LSM4-201ENST00000252816 ADAT2Q7Z6V5 191 aaKnown RBP23.33■■□□□ 1.33
LSM4-201ENST00000252816 PRPF39Q86UA1 669 aaKnown RBP23.33■■□□□ 1.33
LSM4-201ENST00000252816 CPNE8Q86YQ8 564 aa23.33■■□□□ 1.33
LSM4-201ENST00000252816 CASKIN2Q8WXE0 1202 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms