RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Ddr1Q03146 911 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Cog7Q3UM29 770 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Nxph1Q61200 271 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Ndrg1Q62433 394 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 SugctQ7TNE1 436 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Gpt2Q8BGT5 522 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Lrrc45Q8CIM1 670 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Lrrc25Q8K1T1 297 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Anks3Q9CZK6 655 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Efhc2Q9D485 750 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Ubqln5Q9D4I8 510 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Mrpl4Q9DCU6 294 aaKnown RBP17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 SrfQ9JM73 504 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Enpp2Q9R1E6 862 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Zkscan5Q9Z1D8 819 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Jmjd1cQ69ZK6 2350 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 4930426L09RikE9Q0N7 123 aa17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 AlpiF8VPQ6 554 aa17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 Ess2O70279 479 aa17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 Pou2f3P31362 431 aa17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 Zscan2Q07230 614 aa17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 PtprnQ60673 979 aa17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 CtcfQ61164 736 aaKnown RBP17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 NntQ61941 1086 aaKnown RBP17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 Baiap3Q80TT2 1134 aa17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 NrcamQ810U4 1256 aa17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 Wdr74Q8VCG3 384 aa17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 Prss28Q924N9 274 aa17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 Ddx56Q9D0R4 546 aaKnown RBP17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 Cyp4v2Q9DBW0 525 aa17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 Vnn3Q9QZ25 500 aa17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 Shroom3Q9QXN0 1986 aa17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 Hectd1Q69ZR2 2618 aaKnown RBP17.23■□□□□ 0.35
Trim54-201ENSMUST00000013771 A0A286YDP4 300 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Cilp2D3Z7H8 1162 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Epha8O09127 1004 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Ccnb1P24860 430 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Serpina3cP29621 417 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 GssP51855 474 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Casp4P70343 373 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Klra9Q2TJJ8 266 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 TceancQ3US16 359 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Eef2kmtQ3UZW7 335 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Sema4aQ62178 760 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Usp7Q6A4J8 1103 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 TxlnaQ6PAM1 554 aaKnown RBP17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 InavaQ7TN12 663 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Hus1Q8BQY8 280 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Mpp7Q8BVD5 576 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Commd10Q8JZY2 202 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Fermt3Q8K1B8 665 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Glcci1Q8K3I9 537 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Asz1Q8VD46 475 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Sar1bQ9CQC9 198 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Sp2Q9D2H6 612 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Mzb1Q9D8I1 188 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Abcg8Q9DBM0 673 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Serpina1fQ9DCQ7 411 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 ChmlQ9QZD5 621 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Il18bpQ9Z0M9 193 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 HephQ9Z0Z4 1157 aa17.22■□□□□ 0.35
Trim54-201ENSMUST00000013771 Gm13101A2ASJ0 481 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Gm3594E9Q2A7 267 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Vmn2r67K7N6T2 851 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Enc1O35709 589 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 RngttO55236 597 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Avpr2O88721 371 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Zfy2P20662 777 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Gna12P27600 379 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 NsfP46460 744 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Tnks2Q3UES3 1166 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Lrig3Q6P1C6 1117 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Kif11Q6P9P6 1052 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Med16Q6PGF3 828 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Trpm4Q7TN37 1213 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Dars2Q8BIP0 653 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Kiaa1671Q8BRV5 308 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Q8BZE1 841 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Proser2Q8C5R2 471 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Spdye4bQ8CDE8 236 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 PvrQ8K094 408 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Prpf39Q8K2Z2 665 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Ctage5Q8R311 779 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Nup85Q8R480 656 aaKnown RBP17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 EpgnQ924X1 152 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Gprc5dQ9JIL6 344 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Ptk2bQ9QVP9 1009 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Dio2Q9Z1Y9 266 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Mtmr7Q9Z2C9 660 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 CorinQ9Z319 1113 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Fer1l4A3KGK3 1992 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 PikfyveQ9Z1T6 2097 aa17.21■□□□□ 0.35
Trim54-201ENSMUST00000013771 Rhox3fA2ANE1 215 aa17.21■□□□□ 0.34
Trim54-201ENSMUST00000013771 Zscan4dA7KBS4 506 aa17.21■□□□□ 0.34
Trim54-201ENSMUST00000013771 Arhgap42B2RQE8 841 aa17.21■□□□□ 0.34
Trim54-201ENSMUST00000013771 Lekr1B2RVN1 116 aa17.21■□□□□ 0.34
Trim54-201ENSMUST00000013771 Gm4297D3YWB7 211 aa17.21■□□□□ 0.34
Trim54-201ENSMUST00000013771 Arg2O08691 354 aa17.21■□□□□ 0.34
Trim54-201ENSMUST00000013771 Srpk1O70551 648 aaKnown RBP17.21■□□□□ 0.34
Trim54-201ENSMUST00000013771 Prdx3P20108 257 aa17.21■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 49.1 ms