RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 AFMIDQ63HM1 303 aa22.21■■□□□ 1.15
SCN1B-206ENST00000638536 DPY19L3Q6ZPD9 716 aa22.21■■□□□ 1.15
SCN1B-206ENST00000638536 ARHGAP36Q6ZRI8 547 aa22.21■■□□□ 1.15
SCN1B-206ENST00000638536 TMTC1Q8IUR5 882 aa22.21■■□□□ 1.15
SCN1B-206ENST00000638536 VOPP1Q96AW1 172 aa22.21■■□□□ 1.15
SCN1B-206ENST00000638536 ZNF419Q96HQ0 510 aaPredicted RBP22.21■■□□□ 1.15
SCN1B-206ENST00000638536 HSPA12BQ96MM6 686 aa22.21■■□□□ 1.15
SCN1B-206ENST00000638536 NEUROG2Q9H2A3 272 aa22.21■■□□□ 1.15
SCN1B-206ENST00000638536 GOLPH3Q9H4A6 298 aa22.21■■□□□ 1.15
SCN1B-206ENST00000638536 SEMA4GQ9NTN9 838 aa22.21■■□□□ 1.15
SCN1B-206ENST00000638536 IMPACTQ9P2X3 320 aa22.21■■□□□ 1.15
SCN1B-206ENST00000638536 SALL4Q9UJQ4 1053 aa22.21■■□□□ 1.15
SCN1B-206ENST00000638536 PATE3B3GLJ2 98 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 J3KR12 359 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 BUB1O43683 1085 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 NDUFS2O75306 463 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 DRD3P35462 400 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 CYLC1P35663 651 aaPredicted RBP22.2■■□□□ 1.15
SCN1B-206ENST00000638536 MPLP40238 635 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 PAPOLAP51003 745 aaKnown RBP22.2■■□□□ 1.15
SCN1B-206ENST00000638536 TCEAL1Q15170 157 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 HADHQ16836 314 aaKnown RBP22.2■■□□□ 1.15
SCN1B-206ENST00000638536 PARP15Q460N3 678 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 TCEAL6Q6IPX3 200 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 ACRBPQ8NEB7 543 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 FAM71BQ8TC56 605 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 OR8D1Q8WZ84 308 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 TCEAL3Q969E4 200 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 TM6SF2Q9BZW4 377 aa22.2■■□□□ 1.15
SCN1B-206ENST00000638536 H3BRJ5 948 aa22.2■■□□□ 1.14
SCN1B-206ENST00000638536 MAOBP27338 520 aa22.2■■□□□ 1.14
SCN1B-206ENST00000638536 GKP32189 559 aa22.2■■□□□ 1.14
SCN1B-206ENST00000638536 MAN1A1P33908 653 aa22.2■■□□□ 1.14
SCN1B-206ENST00000638536 ARL4AP40617 200 aa22.2■■□□□ 1.14
SCN1B-206ENST00000638536 DNA2P51530 1060 aa22.2■■□□□ 1.14
SCN1B-206ENST00000638536 NDST2P52849 883 aa22.2■■□□□ 1.14
SCN1B-206ENST00000638536 SF3A2Q15428 464 aaKnown RBP22.2■■□□□ 1.14
SCN1B-206ENST00000638536 PIP4K2CQ8TBX8 421 aa22.2■■□□□ 1.14
SCN1B-206ENST00000638536 PIGKQ92643 395 aa22.2■■□□□ 1.14
SCN1B-206ENST00000638536 BAG1Q99933 345 aaPredicted RBP22.2■■□□□ 1.14
SCN1B-206ENST00000638536 C6orf106Q9H6K1 298 aaPredicted RBP22.2■■□□□ 1.14
SCN1B-206ENST00000638536 HPCAL4Q9UM19 191 aa22.2■■□□□ 1.14
SCN1B-206ENST00000638536 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.2■■□□□ 1.14
SCN1B-206ENST00000638536 DUSP10Q9Y6W6 482 aa22.2■■□□□ 1.14
SCN1B-206ENST00000638536 RNASEH2AO75792 299 aaKnown RBP22.19■■□□□ 1.14
SCN1B-206ENST00000638536 OXTRP30559 389 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 CHRNA3P32297 505 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 DPYSL3Q14195 570 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 SPA17Q15506 151 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 LYSMD4Q5XG99 296 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 HDDC3Q8N4P3 179 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 OR6K2Q8NGY2 324 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 GANCQ8TET4 914 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 CEP44Q9C0F1 390 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 PDFQ9HBH1 243 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 RXFP3Q9NSD7 469 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 PCDHGA5Q9Y5G8 931 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 SLCO1B1Q9Y6L6 691 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 WASF2Q9Y6W5 498 aa22.19■■□□□ 1.14
SCN1B-206ENST00000638536 A0A0U1RQJ8 604 aa22.18■■□□□ 1.14
SCN1B-206ENST00000638536 C5AR1P21730 350 aa22.18■■□□□ 1.14
SCN1B-206ENST00000638536 ARHGAP25P42331 645 aa22.18■■□□□ 1.14
SCN1B-206ENST00000638536 ZNF135P52742 658 aaPredicted RBP22.18■■□□□ 1.14
SCN1B-206ENST00000638536 KRT81Q14533 505 aa22.18■■□□□ 1.14
SCN1B-206ENST00000638536 TTC31Q49AM3 519 aaPredicted RBP22.18■■□□□ 1.14
SCN1B-206ENST00000638536 SPDYCQ5MJ68 293 aa22.18■■□□□ 1.14
SCN1B-206ENST00000638536 USP30Q70CQ3 517 aa22.18■■□□□ 1.14
SCN1B-206ENST00000638536 CYP2U1Q7Z449 544 aa22.18■■□□□ 1.14
SCN1B-206ENST00000638536 GRIN3AQ8TCU5 1115 aa22.18■■□□□ 1.14
SCN1B-206ENST00000638536 RAPGEF5Q92565 580 aa22.18■■□□□ 1.14
SCN1B-206ENST00000638536 BTBD1Q9H0C5 482 aa22.18■■□□□ 1.14
SCN1B-206ENST00000638536 PILRBQ9UKJ0 227 aa22.18■■□□□ 1.14
SCN1B-206ENST00000638536 TMCC1O94876 653 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 ADH1BP00325 375 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 NOP2P46087 812 aaKnown RBP22.17■■□□□ 1.14
SCN1B-206ENST00000638536 CYTH1Q15438 398 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 CARD16Q5EG05 197 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 ARSIQ5FYB1 569 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 ATXN7L2Q5T6C5 722 aaPredicted RBP22.17■■□□□ 1.14
SCN1B-206ENST00000638536 PCDH20Q8N6Y1 951 aaKnown RBP22.17■■□□□ 1.14
SCN1B-206ENST00000638536 PCDH19Q8TAB3 1148 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 OMDQ99983 421 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 LACRTQ9GZZ8 138 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 SCML1Q9UN30 329 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 ANKRD36A6QL64 1941 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 CXorf51AA0A1B0GTR3 108 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 DFFAO00273 331 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 ALOX15BO15296 676 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 GDF9O60383 454 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 BUB1BO60566 1050 aaPredicted RBP22.17■■□□□ 1.14
SCN1B-206ENST00000638536 PRAMEF11O60813 436 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 SEMA4FO95754 770 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 ZNF806P0C7X5 589 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 COMTP21964 271 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 CCNHP51946 323 aaPredicted RBP22.17■■□□□ 1.14
SCN1B-206ENST00000638536 CSRP2Q16527 193 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 DCAF12L1Q5VU92 463 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.17■■□□□ 1.14
SCN1B-206ENST00000638536 KCTD6Q8NC69 237 aa22.17■■□□□ 1.14
SCN1B-206ENST00000638536 ISG20Q96AZ6 181 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms