RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 GAS8O95995 478 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 ANPEPP15144 967 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 AMPD1P23109 780 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 PTPN4P29074 926 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 THPOP40225 353 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 NR4A2P43354 598 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 KRT6CP48668 564 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 NDUFV1P49821 464 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 HK2P52789 917 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 EIF3BP55884 814 aaKnown RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 POLR2GP62487 172 aaKnown RBP eCLIP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 LMNB2Q03252 620 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 CHRNEQ04844 493 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 KDSRQ06136 332 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 SP140Q13342 867 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 DHX34Q14147 1143 aaKnown RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 SURF1Q15526 300 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 CA9Q16790 459 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 MMEL1Q495T6 779 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 BSPRYQ5W0U4 402 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 RGMBQ6NW40 437 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 TRAF7Q6Q0C0 670 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 RAPH1Q70E73 1250 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 GPR141Q7Z602 305 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 ARPINQ7Z6K5 226 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 TICAM1Q8IUC6 712 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 AADATQ8N5Z0 425 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 ATP6V0D2Q8N8Y2 350 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 PCYOX1LQ8NBM8 494 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 TAMM41Q96BW9 452 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 PEBP4Q96S96 227 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 C17orf80Q9BSJ5 609 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 FOXP3Q9BZS1 431 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 UNKQ9C0B0 810 aaKnown RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 CDH19Q9H159 772 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 S100A14Q9HCY8 104 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 SAYSD1Q9NPB0 183 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 AVENQ9NQS1 362 aaPredicted RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 NDE1Q9NXR1 346 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 GNEQ9Y223 722 aaKnown RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 NOD1Q9Y239 953 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 ATP11BQ9Y2G3 1177 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 MFHAS1Q9Y4C4 1052 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 SHROOM3Q8TF72 1996 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 C17orf102A2RUQ5 167 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 SLC15A5A6NIM6 579 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 ATP6V1G2-DDX39BF2Z307 99 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 M0QX08 132 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 FSCN2O14926 492 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 KLHL41O60662 606 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 GSTM1P09488 218 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 DARSP14868 501 aaKnown RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 CDH2P19022 906 aaPredicted RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 CRABP2P29373 138 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 CCND3P30281 292 aaPredicted RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 GPD2P43304 727 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 HADHBP55084 474 aaKnown RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 TPTEP56180 551 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 HSD17B7P56937 341 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 BCAR1P56945 870 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 PITX1P78337 314 aaPredicted RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 CD83Q01151 205 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 GALNT1Q10472 559 aaPredicted RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 ASPHQ12797 758 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 NME3Q13232 169 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 KRT81Q14533 505 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 EFTUD2Q15029 972 aaKnown RBP eCLIP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 SOWAHAQ2M3V2 549 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 ANO4Q32M45 955 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 GDF6Q6KF10 455 aaPredicted RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 TRIM72Q6ZMU5 477 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 ZNF410Q86VK4 478 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 PYROXD2Q8N2H3 581 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 UBR7Q8N806 425 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 OR6Y1Q8NGX8 325 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 CHPT1Q8WUD6 406 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 TRIB2Q92519 343 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 RMDN1Q96DB5 314 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 TRIM56Q9BRZ2 755 aaKnown RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 DCUN1D5Q9BTE7 237 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 MED10Q9BTT4 135 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 HERC2P3Q9BVR0 1158 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 EPB41L4BQ9H329 900 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 VPS37BQ9H9H4 285 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 TRMT13Q9NUP7 481 aaKnown RBP5.66□□□□□ -1.5
CPNE4-214ENST00000617767 GIMAP4Q9NUV9 329 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 DPP7Q9UHL4 492 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 USP18Q9UMW8 372 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 IPPQ9Y573 584 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 REV3LO60673 3130 aa5.66□□□□□ -1.5
CPNE4-214ENST00000617767 TCRBV7S3A2A0A539 114 aa5.65□□□□□ -1.5
CPNE4-214ENST00000617767 CENPBD1B2RD01 187 aa5.65□□□□□ -1.5
CPNE4-214ENST00000617767 J3QRK9 145 aa5.65□□□□□ -1.5
CPNE4-214ENST00000617767 MUSKO15146 869 aa5.65□□□□□ -1.5
CPNE4-214ENST00000617767 ALOX15BO15296 676 aa5.65□□□□□ -1.5
CPNE4-214ENST00000617767 MED7O43513 233 aa5.65□□□□□ -1.5
CPNE4-214ENST00000617767 AVILO75366 819 aa5.65□□□□□ -1.5
CPNE4-214ENST00000617767 BEST1O76090 585 aa5.65□□□□□ -1.5
CPNE4-214ENST00000617767 F2P00734 622 aa5.65□□□□□ -1.5
CPNE4-214ENST00000617767 VCLP18206 1134 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms