RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 BCAT1P54687 386 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 GEN1Q17RS7 908 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 ARHGAP17Q68EM7 881 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 SLC26A9Q7LBE3 791 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 PLPPR4Q7Z2D5 763 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 ELMO2Q96JJ3 720 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 C12orf42Q96LP6 360 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 PRICKLE1Q96MT3 831 aaPredicted RBP20.73■□□□□ 0.91
SSBP3-216ENST00000610401 CCT7Q99832 543 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 TTC24A2A3L6 582 aaPredicted RBP20.73■□□□□ 0.91
SSBP3-216ENST00000610401 SAC3D1A6NKF1 404 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 MATN2O00339 956 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 ASLP04424 464 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 FAM200BP0CF97 657 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 EDNRBP24530 442 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 TKTL1P51854 596 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 ADGRE1Q14246 886 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 ZNF423Q2M1K9 1284 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 AGKQ53H12 422 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 CLEC6AQ6EIG7 209 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 LRRC8EQ6NSJ5 796 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 ANKRD52Q8NB46 1076 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 VPS33BQ9H267 617 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 PIF1Q9H611 641 aa20.73■□□□□ 0.91
SSBP3-216ENST00000610401 FBRSL1Q9HCM7 1045 aaKnown RBP20.73■□□□□ 0.91
SSBP3-216ENST00000610401 PIN4Q9Y237 131 aaKnown RBP20.73■□□□□ 0.91
SSBP3-216ENST00000610401 YJEFN3A6XGL0 299 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 E7ENX8 843 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 AHSGP02765 367 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 MT-ND1P03886 318 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 CHRNA4P43681 627 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 TTLL4Q14679 1199 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 KRT80Q6KB66 452 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 ESRP1Q6NXG1 681 aaKnown RBP20.72■□□□□ 0.91
SSBP3-216ENST00000610401 C16orf89Q6UX73 402 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 PSTKQ8IV42 348 aaKnown RBP20.72■□□□□ 0.91
SSBP3-216ENST00000610401 MLPHQ9BV36 600 aaPredicted RBP20.72■□□□□ 0.91
SSBP3-216ENST00000610401 TNFRSF12AQ9NP84 129 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 BRWD3Q6RI45 1802 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 TIPRLO75663 272 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 CD68P34810 354 aaPredicted RBP20.72■□□□□ 0.91
SSBP3-216ENST00000610401 FBXO47Q5MNV8 452 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 POTEAQ6S8J7 498 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 IFNEQ86WN2 208 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 ZFP42Q96MM3 310 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 Q9H521 79 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 OXSMQ9NWU1 459 aa20.72■□□□□ 0.91
SSBP3-216ENST00000610401 ZNF646O15015 1829 aaPredicted RBP20.72■□□□□ 0.91
SSBP3-216ENST00000610401 H3BRB1 525 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 PLOD2O00469 737 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 DLX3O60479 287 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 FAM58BPP0C7Q3 252 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 PPARGP37231 505 aaPredicted RBP20.71■□□□□ 0.91
SSBP3-216ENST00000610401 PRPSAP1Q14558 356 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 ERLEC1Q96DZ1 483 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 TMEM79Q9BSE2 394 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 ULBP1Q9BZM6 244 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 TUT1Q9H6E5 874 aaKnown RBP20.71■□□□□ 0.91
SSBP3-216ENST00000610401 ZDHHC7Q9NXF8 308 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 EGFL7Q9UHF1 273 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 ZNF112Q9UJU3 913 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 USP3Q9Y6I4 520 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 C7orf72A4D263 438 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 ZNF839A8K0R7 811 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 TMX2-CTNND1H3BSU7 103 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 PDLIM1O00151 329 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 GLDCP23378 1020 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 SOX4Q06945 474 aaPredicted RBP20.71■□□□□ 0.91
SSBP3-216ENST00000610401 KBTBD7Q8WVZ9 684 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 LENG1Q96BZ8 264 aaPredicted RBP20.71■□□□□ 0.91
SSBP3-216ENST00000610401 HSPBAP1Q96EW2 488 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 HAPLN3Q96S86 360 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 SLC29A1Q99808 456 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 LMCD1Q9NZU5 365 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 PTGDR2Q9Y5Y4 395 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 YWHAQP27348 245 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 GABRB3P28472 473 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 SPANXN3Q5MJ09 141 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 C9orf57Q5W0N0 161 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 APPL2Q8NEU8 664 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 APBB2Q92870 758 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 EMID1Q96A84 441 aaPredicted RBP20.71■□□□□ 0.91
SSBP3-216ENST00000610401 POMKQ9H5K3 350 aa20.71■□□□□ 0.91
SSBP3-216ENST00000610401 PHIPQ8WWQ0 1821 aa20.7■□□□□ 0.91
SSBP3-216ENST00000610401 GAS2O43903 313 aaKnown RBP20.7■□□□□ 0.9
SSBP3-216ENST00000610401 SBK3P0C264 359 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 PSMC3P17980 439 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 PTPN9P43378 593 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 SLC25A52Q3SY17 297 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 WSCD1Q658N2 575 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 B3GNT6Q6ZMB0 384 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 ADGRG6Q86SQ4 1221 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 BEST2Q8NFU1 509 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 EFCAB1Q9HAE3 211 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 KIAA1257Q9ULG3 409 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 ZNF638Q14966 1978 aaKnown RBP20.7■□□□□ 0.9
SSBP3-216ENST00000610401 RGPD3A6NKT7 1758 aaPredicted RBP20.7■□□□□ 0.9
SSBP3-216ENST00000610401 RGPD4Q7Z3J3 1758 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 CDH13P55290 713 aa20.7■□□□□ 0.9
SSBP3-216ENST00000610401 PIGGQ5H8A4 983 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms