RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ETFBP38117 255 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 DPP6P42658 865 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 ZNF75DP51815 510 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 LIMK1P53667 647 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 ADPRHP54922 357 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 DPYSQ14117 519 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 PIGHQ14442 188 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 ACAP1Q15027 740 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 POLD3Q15054 466 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 DUOXA1Q1HG43 343 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 SMTNL2Q2TAL5 461 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 POM121L1PQ3SYA9 428 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 PPP6R3Q5H9R7 873 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 KCNT1Q5JUK3 1230 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 STPG1Q5TH74 334 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 NCEH1Q6PIU2 408 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 LEKR1Q6ZMV7 388 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 DPY19L3Q6ZPD9 716 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 RFX8Q6ZV50 586 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 PSTKQ8IV42 348 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 CNGA4Q8IV77 575 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 HDDC3Q8N4P3 179 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 NPWQ8N729 165 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 PIP4K2CQ8TBX8 421 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 ZNF564Q8TBZ8 553 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 GANCQ8TET4 914 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 BIRC7Q96CA5 298 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 EIF3CQ99613 913 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 CEP44Q9C0F1 390 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 LRRC19Q9H756 370 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 CATSPERBQ9H7T0 1116 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 NHEJ1Q9H9Q4 299 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 CWC15Q9P013 229 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 IP6K2Q9UHH9 426 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 EIF2B4Q9UI10 523 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 CDV3Q9UKY7 258 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 WASF2Q9Y6W5 498 aa11.21□□□□□ -0.61
SHKBP1-206ENST00000595523 TDRD6O60522 2096 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 AKR1B15C9JRZ8 316 aaPredicted RBP11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 TM4SF5O14894 197 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 AKR1B10O60218 316 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 CFIP05156 583 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 TPM1P09493 284 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 RARAP10276 462 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 ENGP17813 658 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 ERCC2P18074 760 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 CHRNA3P32297 505 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 YBEYP58557 167 aaPredicted RBP11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 PPP2CBP62714 309 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 PPP2CAP67775 309 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 SLC20A2Q08357 652 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 CNTN1Q12860 1018 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 SERINC3Q13530 473 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 PUM1Q14671 1186 aaKnown RBP eCLIP11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 DPYSL2Q16555 572 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 PARP15Q460N3 678 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 WDR45BQ5MNZ6 344 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 SYCP2LQ5T4T6 812 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 AGBL4Q5VU57 503 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 AFMIDQ63HM1 303 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 KIAA0895LQ68EN5 471 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 DSG4Q86SJ6 1040 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 ARHGAP12Q8IWW6 846 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 RGL4Q8IZJ4 473 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 ZCCHC9Q8N567 271 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 PCDH20Q8N6Y1 951 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 NETO2Q8NC67 525 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 TMIEQ8NEW7 156 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 CEP76Q8TAP6 659 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 ARRDC3Q96B67 414 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 MRFAP1L1Q96HT8 127 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 CELF6Q96J87 481 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 OMDQ99983 421 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 DEF6Q9H4E7 631 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 ZWILCHQ9H900 591 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 EBF2Q9HAK2 575 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 PDFQ9HBH1 243 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 OSGEPQ9NPF4 335 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 ZNHIT6Q9NWK9 470 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 SLC6A14Q9UN76 642 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 NCKAP1Q9Y2A7 1128 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 MFHAS1Q9Y4C4 1052 aa11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 ARID1BQ8NFD5 2236 aaPredicted RBP11.2□□□□□ -0.62
SHKBP1-206ENST00000595523 DCDC2BA2VCK2 349 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 FAM47DPA6NHR8 397 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 C4orf47A7E2U8 309 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 PLRG1O43660 514 aaKnown RBP11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 LEFTY1O75610 366 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 TMCC1O94876 653 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 FSBPO95073 299 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 H2AFZP0C0S5 128 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 TMEM253P0C7T8 217 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 GKP32189 559 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 HCAR3P49019 387 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 CCNHP51946 323 aaPredicted RBP11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 NDST2P52849 883 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 TAS2R38P59533 333 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 BNC1Q01954 994 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 CARD16Q5EG05 197 aa11.19□□□□□ -0.62
SHKBP1-206ENST00000595523 PIP5KL1Q5T9C9 394 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms