RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 SLC27A5Q9Y2P5 690 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 DOCK4Q8N1I0 1966 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 IGLV3-10A0A075B6K4 115 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 RTN3O95197 1032 aaPredicted RBP20.01■□□□□ 0.79
CLIP3-206ENST00000593074 MPOP05164 745 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 RHOQP17081 205 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 PTPN4P29074 926 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 KRT72Q14CN4 511 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 CCDC153Q494R4 210 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 RTP2Q5QGT7 225 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 PKN3Q6P5Z2 889 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLIP3-206ENST00000593074 PTCD2Q8WV60 388 aaKnown RBP20.01■□□□□ 0.79
CLIP3-206ENST00000593074 ATXN7L3BQ96GX2 97 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 PRR11Q96HE9 360 aaPredicted RBP20.01■□□□□ 0.79
CLIP3-206ENST00000593074 FICDQ9BVA6 458 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 WWP1Q9H0M0 922 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 ENTPD7Q9NQZ7 604 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 IARS2Q9NSE4 1012 aaKnown RBP20.01■□□□□ 0.79
CLIP3-206ENST00000593074 OLA1Q9NTK5 396 aaKnown RBP20.01■□□□□ 0.79
CLIP3-206ENST00000593074 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLIP3-206ENST00000593074 RBM22Q9NW64 420 aaKnown RBP eCLIP20.01■□□□□ 0.79
CLIP3-206ENST00000593074 TMEM248Q9NWD8 314 aa20.01■□□□□ 0.79
CLIP3-206ENST00000593074 IPO11Q9UI26 975 aaKnown RBP20.01■□□□□ 0.79
CLIP3-206ENST00000593074 MTMR11A4FU01 709 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 A8MUI8 341 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 TBC1D4O60343 1298 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 PEX11BO96011 259 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 SLC8A1P32418 973 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 PBX3P40426 434 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 CSRP3P50461 194 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 EFEMP1Q12805 493 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 TRIP4Q15650 581 aaPredicted RBP20■□□□□ 0.79
CLIP3-206ENST00000593074 MGAT5BQ3V5L5 792 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 ICE2Q659A1 982 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 RSPO2Q6UXX9 243 aaPredicted RBP20■□□□□ 0.79
CLIP3-206ENST00000593074 SLC39A5Q6ZMH5 540 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 RNF19BQ6ZMZ0 732 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 ANKS3Q6ZW76 656 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 ANKRD33Q7Z3H0 272 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 CNTN4Q8IWV2 1026 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 PPP1R14CQ8TAE6 165 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 FBXO32Q969P5 355 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 VPS39Q96JC1 886 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 SIKE1Q9BRV8 207 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 TTPALQ9BTX7 342 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 TBC1D10AQ9BXI6 508 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 OXCT2Q9BYC2 517 aaPredicted RBP20■□□□□ 0.79
CLIP3-206ENST00000593074 PPP1R12CQ9BZL4 782 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 ZYG11BQ9C0D3 744 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 MRM3Q9HC36 420 aaKnown RBP20■□□□□ 0.79
CLIP3-206ENST00000593074 ARL8BQ9NVJ2 186 aa20■□□□□ 0.79
CLIP3-206ENST00000593074 FCHO1O14526 889 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 SOAT2O75908 522 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 SERPINE1P05121 402 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 ATP5BP06576 529 aaKnown RBP19.99■□□□□ 0.79
CLIP3-206ENST00000593074 KCNA4P22459 653 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 HADHAP40939 763 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 PSEN1P49768 467 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 POTEHQ6S545 545 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 TAS1R1Q7RTX1 841 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 ALYREFQ86V81 257 aaKnown RBP19.99■□□□□ 0.79
CLIP3-206ENST00000593074 ATP6V0D2Q8N8Y2 350 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 BTN2A3PQ96KV6 586 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 SPATA17Q96L03 361 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 GPR22Q99680 433 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 SEPT5Q99719 369 aaPredicted RBP19.99■□□□□ 0.79
CLIP3-206ENST00000593074 NMUR2Q9GZQ4 415 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 DONSONQ9NYP3 566 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 MRPL42Q9Y6G3 142 aaKnown RBP19.99■□□□□ 0.79
CLIP3-206ENST00000593074 MYLKQ15746 1914 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 A0A096LPK6 155 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 VNN2O95498 520 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 IGLV3-27P01718 113 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 F7P08709 466 aaPredicted RBP19.99■□□□□ 0.79
CLIP3-206ENST00000593074 HAPLN1P10915 354 aaPredicted RBP19.99■□□□□ 0.79
CLIP3-206ENST00000593074 GRK2P25098 689 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 PSMD5Q16401 504 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 DEFB128Q7Z7B8 93 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 TTC7BQ86TV6 843 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 C10orf107Q8IVU9 208 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 LRRC43Q8N309 656 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 MRGPRX2Q96LB1 330 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 TLR8Q9NR97 1041 aaKnown RBP19.99■□□□□ 0.79
CLIP3-206ENST00000593074 MARCOQ9UEW3 520 aaPredicted RBP19.99■□□□□ 0.79
CLIP3-206ENST00000593074 GREB1Q4ZG55 1949 aa19.99■□□□□ 0.79
CLIP3-206ENST00000593074 ITM2AO43736 263 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 WFS1O76024 890 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 GMPRP36959 345 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 SLC1A6P48664 564 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 AQP5P55064 265 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 HNRNPDQ14103 355 aaKnown RBP19.98■□□□□ 0.79
CLIP3-206ENST00000593074 POU6F1Q14863 301 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 RANBP10Q6VN20 620 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 ZC3HC1Q86WB0 502 aaKnown RBP19.98■□□□□ 0.79
CLIP3-206ENST00000593074 TMEM173Q86WV6 379 aaPredicted RBP19.98■□□□□ 0.79
CLIP3-206ENST00000593074 PLD6Q8N2A8 252 aaKnown RBP19.98■□□□□ 0.79
CLIP3-206ENST00000593074 PPHLN1Q8NEY8 458 aaKnown RBP19.98■□□□□ 0.79
CLIP3-206ENST00000593074 OR6Y1Q8NGX8 325 aa19.98■□□□□ 0.79
CLIP3-206ENST00000593074 C2orf15Q8WU43 125 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms