RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 PDCD7Q8N8D1 485 aaKnown RBP13.93□□□□□ -0.18
CCDC40-209ENST00000573474 DCAF4L2Q8NA75 395 aa13.93□□□□□ -0.18
CCDC40-209ENST00000573474 ATP2A3Q93084 1043 aa13.93□□□□□ -0.18
CCDC40-209ENST00000573474 ELSPBP1Q96BH3 223 aa13.93□□□□□ -0.18
CCDC40-209ENST00000573474 ZNF419Q96HQ0 510 aaPredicted RBP13.93□□□□□ -0.18
CCDC40-209ENST00000573474 PWWP2AQ96N64 755 aa13.93□□□□□ -0.18
CCDC40-209ENST00000573474 RBM15Q96T37 977 aaKnown RBP eCLIP13.93□□□□□ -0.18
CCDC40-209ENST00000573474 C2orf49Q9BVC5 232 aaPredicted RBP13.93□□□□□ -0.18
CCDC40-209ENST00000573474 FUT8Q9BYC5 575 aa13.93□□□□□ -0.18
CCDC40-209ENST00000573474 SLC25A51Q9H1U9 297 aa13.93□□□□□ -0.18
CCDC40-209ENST00000573474 POMKQ9H5K3 350 aa13.93□□□□□ -0.18
CCDC40-209ENST00000573474 ZNF446Q9NWS9 450 aa13.93□□□□□ -0.18
CCDC40-209ENST00000573474 SEPT3Q9UH03 358 aa13.93□□□□□ -0.18
CCDC40-209ENST00000573474 AAR2Q9Y312 384 aaKnown RBP13.93□□□□□ -0.18
CCDC40-209ENST00000573474 TTLL3Q9Y4R7 772 aa13.93□□□□□ -0.18
CCDC40-209ENST00000573474 TRIOBPQ9H2D6 2365 aa13.93□□□□□ -0.18
CCDC40-209ENST00000573474 CXorf51AA0A1B0GTR3 108 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 ALOX15BO15296 676 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 HOXC11O43248 304 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-209ENST00000573474 SNAP91O60641 907 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 SUN1O94901 812 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 AP2A1O95782 977 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 CYP17A1P05093 508 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 ADH5P11766 374 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 MLNP12872 115 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 CD70P32970 193 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 PMS2P54278 862 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 GEMP55040 296 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 GEMIN4P57678 1058 aaKnown RBP13.92□□□□□ -0.18
CCDC40-209ENST00000573474 ARF5P84085 180 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 SLC20A2Q08357 652 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 ITKQ08881 620 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 FCHO2Q0JRZ9 810 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 DMC1Q14565 340 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 PLEKHG6Q3KR16 790 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 INO80DQ53TQ3 878 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-209ENST00000573474 FNBP1LQ5T0N5 605 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 SYCP2LQ5T4T6 812 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 RETSATQ6NUM9 610 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 VITQ6UXI7 678 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 TRMT10CQ7L0Y3 403 aaKnown RBP13.92□□□□□ -0.18
CCDC40-209ENST00000573474 YAF2Q8IY57 180 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 APCDD1Q8J025 514 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 SUSD6Q92537 303 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 ACDQ96AP0 544 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 ASIC4Q96FT7 647 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 FAM83CQ9BQN1 747 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 GORASP1Q9BQQ3 440 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 MLPHQ9BV36 600 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-209ENST00000573474 LRRC40Q9H9A6 602 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 XAB2Q9HCS7 855 aaKnown RBP13.92□□□□□ -0.18
CCDC40-209ENST00000573474 SAYSD1Q9NPB0 183 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 ABCB8Q9NUT2 735 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 DNAJC17Q9NVM6 304 aaKnown RBP13.92□□□□□ -0.18
CCDC40-209ENST00000573474 VPS51Q9UID3 782 aa13.92□□□□□ -0.18
CCDC40-209ENST00000573474 USP15Q9Y4E8 981 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-209ENST00000573474 CHD5Q8TDI0 1954 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 E7ESA3 106 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 ECI2O75521 394 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 ARSAP15289 507 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 HLA-FP30511 346 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 MAGEA4P43358 317 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 NUMBP49757 651 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 PDIA2Q13087 525 aaKnown RBP13.91□□□□□ -0.18
CCDC40-209ENST00000573474 NR1H3Q13133 447 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 CYTH1Q15438 398 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 DNAJC21Q5F1R6 531 aaKnown RBP13.91□□□□□ -0.18
CCDC40-209ENST00000573474 PITRM1Q5JRX3 1037 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 KCTD11Q693B1 232 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 TRIM68Q6AZZ1 485 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 ASTLQ6HA08 431 aaPredicted RBP13.91□□□□□ -0.18
CCDC40-209ENST00000573474 GPR153Q6NV75 609 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 LRRC8BQ6P9F7 803 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 MTSS1LQ765P7 747 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 CAND1Q86VP6 1230 aaKnown RBP13.91□□□□□ -0.18
CCDC40-209ENST00000573474 PGBD5Q8N414 524 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCDC40-209ENST00000573474 TSEN2Q8NCE0 465 aaKnown RBP13.91□□□□□ -0.18
CCDC40-209ENST00000573474 IMP4Q96G21 291 aaKnown RBP13.91□□□□□ -0.18
CCDC40-209ENST00000573474 OXNAD1Q96HP4 312 aaPredicted RBP13.91□□□□□ -0.18
CCDC40-209ENST00000573474 SERPINB12Q96P63 405 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 PSKH2Q96QS6 385 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 XPO6Q96QU8 1125 aaKnown RBP13.91□□□□□ -0.18
CCDC40-209ENST00000573474 CINPQ9BW66 212 aaPredicted RBP13.91□□□□□ -0.18
CCDC40-209ENST00000573474 POLR1EQ9GZS1 481 aaKnown RBP13.91□□□□□ -0.18
CCDC40-209ENST00000573474 PABPC3Q9H361 631 aaKnown RBP13.91□□□□□ -0.18
CCDC40-209ENST00000573474 VIPAS39Q9H9C1 493 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 EPS15L1Q9UBC2 864 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 GGA2Q9UJY4 613 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 FBXO10Q9UK96 956 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 INTS6Q9UL03 887 aaKnown RBP13.91□□□□□ -0.18
CCDC40-209ENST00000573474 SHROOM3Q8TF72 1996 aa13.91□□□□□ -0.18
CCDC40-209ENST00000573474 AP3B1O00203 1094 aa13.9□□□□□ -0.18
CCDC40-209ENST00000573474 MAP2K7O14733 419 aa13.9□□□□□ -0.18
CCDC40-209ENST00000573474 CD160O95971 181 aa13.9□□□□□ -0.18
CCDC40-209ENST00000573474 PABPC1P11940 636 aaKnown RBP13.9□□□□□ -0.18
CCDC40-209ENST00000573474 PSMC3P17980 439 aa13.9□□□□□ -0.18
CCDC40-209ENST00000573474 CES1P23141 567 aa13.9□□□□□ -0.18
CCDC40-209ENST00000573474 HSD17B3P37058 310 aa13.9□□□□□ -0.18
CCDC40-209ENST00000573474 MAXP61244 160 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms