RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 C10orf120Q5SQS8 335 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 TRAPPC11Q7Z392 1133 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 CLEC14AQ86T13 490 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 TADA2BQ86TJ2 420 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 IQCHQ86VS3 1027 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 SFR1Q86XK3 245 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 SPATS2Q86XZ4 545 aaKnown RBP6.12□□□□□ -1.43
CDH13-212ENST00000569144 WDR49Q8IV35 697 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 GPD1LQ8N335 351 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 CPXM2Q8N436 756 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 ZNF276Q8N554 614 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 FAM26EQ8N5C1 309 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 MFSD2AQ8NA29 543 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 ZMIZ2Q8NF64 920 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 FBXO27Q8NI29 283 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 GANCQ8TET4 914 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 CYB5D2Q8WUJ1 264 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 RAD54LQ92698 747 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 EXTL1Q92935 676 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 SGF29Q96ES7 293 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 CALML4Q96GE6 196 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 SERAC1Q96JX3 654 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 AK8Q96MA6 479 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 SMOQ99835 787 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 CBWD1Q9BRT8 395 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 DCLK3Q9C098 648 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 RSPH9Q9H1X1 276 aaPredicted RBP6.12□□□□□ -1.43
CDH13-212ENST00000569144 NMUR1Q9HB89 426 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 CSNK1G1Q9HCP0 422 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 METTL5Q9NRN9 209 aaKnown RBP6.12□□□□□ -1.43
CDH13-212ENST00000569144 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDH13-212ENST00000569144 FBXL12Q9NXK8 326 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 SEL1LQ9UBV2 794 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 SERGEFQ9UGK8 458 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 SUN2Q9UH99 717 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 FZD4Q9ULV1 537 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 SCML2Q9UQR0 700 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 CORINQ9Y5Q5 1042 aa6.12□□□□□ -1.43
CDH13-212ENST00000569144 PLXNA2O75051 1894 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 BOD1L1Q8NFC6 3051 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 A0A1W2PNU3 283 aaPredicted RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 A0A1W2PQH9 124 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 KIAA0391O15091 583 aaKnown RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 RNASEH1O60930 286 aaKnown RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 KRT38O76015 456 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 BEST1O76090 585 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 GJB6O95452 261 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 CST3P01034 146 aaPredicted RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 DLDP09622 509 aaKnown RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 HLA-FP30511 346 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 CORO1AP31146 461 aaKnown RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 AFMP43652 599 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 DUSP3P51452 185 aaPredicted RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 ANAPC15P60006 121 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 COG7P83436 770 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 OVGP1Q12889 678 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 MPP2Q14168 576 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 WDR72Q3MJ13 1102 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 ARL6IP4Q66PJ3 421 aaKnown RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 NAPEPLDQ6IQ20 393 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 USP53Q70EK8 1073 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 CHST9Q7L1S5 443 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 TMC6Q7Z403 805 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 KIAA0907Q7Z7F0 614 aaPredicted RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 FAM217AQ8IXS0 508 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 SYCP3Q8IZU3 236 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 FUKQ8N0W3 1084 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 AHI1Q8N157 1196 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 SLC25A45Q8N413 288 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 ARL14Q8N4G2 192 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.11□□□□□ -1.43
CDH13-212ENST00000569144 NOC3LQ8WTT2 800 aaKnown RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 DDI1Q8WTU0 396 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 LARP4BQ92615 738 aaKnown RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 RNF34Q969K3 372 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 PRR11Q96HE9 360 aaPredicted RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 TNIP3Q96KP6 325 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 CDK5RAP1Q96SZ6 601 aaKnown RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 ABCG4Q9H172 646 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 SLC25A18Q9H1K4 315 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 NEUROG2Q9H2A3 272 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 PCIF1Q9H4Z3 704 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 MRPL44Q9H9J2 332 aaKnown RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 USP29Q9HBJ7 922 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 ZC3H7BQ9UGR2 993 aaKnown RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 NUDT5Q9UKK9 219 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 AGO1Q9UL18 857 aaKnown RBP6.11□□□□□ -1.43
CDH13-212ENST00000569144 PCDHA5Q9Y5H7 936 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 RELNP78509 3460 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 DOPEY2Q9Y3R5 2298 aa6.11□□□□□ -1.43
CDH13-212ENST00000569144 TP53BP1Q12888 1972 aaPredicted RBP6.1□□□□□ -1.43
CDH13-212ENST00000569144 BLACEA4D250 179 aa6.1□□□□□ -1.43
CDH13-212ENST00000569144 ZNF233A6NK53 670 aa6.1□□□□□ -1.43
CDH13-212ENST00000569144 MID1O15344 667 aa6.1□□□□□ -1.43
CDH13-212ENST00000569144 LATO43561 262 aa6.1□□□□□ -1.43
CDH13-212ENST00000569144 RNASEH2AO75792 299 aaKnown RBP6.1□□□□□ -1.43
CDH13-212ENST00000569144 GCNT3O95395 438 aa6.1□□□□□ -1.43
CDH13-212ENST00000569144 ATP5BP06576 529 aaKnown RBP6.1□□□□□ -1.43
CDH13-212ENST00000569144 GIMD1P0DJR0 217 aa6.1□□□□□ -1.43
CDH13-212ENST00000569144 ALPPL2P10696 532 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms