RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ADPRHP54922 357 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 TPI1P60174 286 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 CNTN1Q12860 1018 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 POLD3Q15054 466 aaPredicted RBP13.95□□□□□ -0.18
SNX6-203ENST00000555416 SLC18A3Q16572 532 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 WDR45BQ5MNZ6 344 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 AGBL4Q5VU57 503 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 KIAA0895LQ68EN5 471 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 RETSATQ6NUM9 610 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.95□□□□□ -0.18
SNX6-203ENST00000555416 TP53INP2Q8IXH6 220 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 FAM131CQ96AQ9 280 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 ARRDC3Q96B67 414 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 CELF6Q96J87 481 aaKnown RBP13.95□□□□□ -0.18
SNX6-203ENST00000555416 OMDQ99983 421 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 RTKNQ9BST9 563 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 NUSAP1Q9BXS6 441 aaKnown RBP13.95□□□□□ -0.18
SNX6-203ENST00000555416 TM6SF2Q9BZW4 377 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 TRIM5Q9C035 493 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 RETREG1Q9H6L5 497 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 CWC15Q9P013 229 aaKnown RBP13.95□□□□□ -0.18
SNX6-203ENST00000555416 ANAPC7Q9UJX3 599 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 FZD4Q9ULV1 537 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 SCML1Q9UN30 329 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 NCKAP1Q9Y2A7 1128 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 WASF2Q9Y6W5 498 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 CACNA1EQ15878 2313 aa13.95□□□□□ -0.18
SNX6-203ENST00000555416 EEF2KO00418 725 aaKnown RBP13.94□□□□□ -0.18
SNX6-203ENST00000555416 WNT9AO14904 365 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 ALOX15BO15296 676 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 KDELR3O43731 214 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 RARAP10276 462 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 PCK1P35558 622 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 DNA2P51530 1060 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 TAS2R38P59533 333 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 PPP2CBP62714 309 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 PPP2CAP67775 309 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 SLC25A11Q02978 314 aaKnown RBP13.94□□□□□ -0.18
SNX6-203ENST00000555416 SLC20A2Q08357 652 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 SERINC3Q13530 473 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 ARSIQ5FYB1 569 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 PPP6R3Q5H9R7 873 aaPredicted RBP13.94□□□□□ -0.18
SNX6-203ENST00000555416 RFX8Q6ZV50 586 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 DGLUCYQ7Z3D6 616 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 UMODL1-AS1Q8N2C9 162 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 NPWQ8N729 165 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 NIPA2Q8N8Q9 360 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 OR6K2Q8NGY2 324 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 OR14C36Q8NHC7 312 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 GRIN3AQ8TCU5 1115 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 PCED1AQ9H1Q7 454 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 LRRC19Q9H756 370 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 ZWILCHQ9H900 591 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 NHEJ1Q9H9Q4 299 aaPredicted RBP13.94□□□□□ -0.18
SNX6-203ENST00000555416 ETNK2Q9NVF9 386 aa13.94□□□□□ -0.18
SNX6-203ENST00000555416 ASCC3Q8N3C0 2202 aaKnown RBP13.94□□□□□ -0.18
SNX6-203ENST00000555416 KNL1Q8NG31 2342 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 PLXNA2O75051 1894 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 CNOT1A5YKK6 2376 aaKnown RBP13.93□□□□□ -0.18
SNX6-203ENST00000555416 SSU72P8A0A1W2PR75 194 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 MED19A0JLT2 244 aaPredicted RBP13.93□□□□□ -0.18
SNX6-203ENST00000555416 J3KR12 359 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 BCAT2O15382 392 aaPredicted RBP13.93□□□□□ -0.18
SNX6-203ENST00000555416 BUB1O43683 1085 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 LEFTY1O75610 366 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 ERCC2P18074 760 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 ETFBP38117 255 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 DPP6P42658 865 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 CSNK1EP49674 416 aaKnown RBP13.93□□□□□ -0.18
SNX6-203ENST00000555416 CCNHP51946 323 aaPredicted RBP13.93□□□□□ -0.18
SNX6-203ENST00000555416 GRIK2Q13002 908 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 DPYSQ14117 519 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 PIGHQ14442 188 aaPredicted RBP13.93□□□□□ -0.18
SNX6-203ENST00000555416 ATP13A4Q4VNC1 1196 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 CARD16Q5EG05 197 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 ATXN7L2Q5T6C5 722 aaPredicted RBP13.93□□□□□ -0.18
SNX6-203ENST00000555416 PIP5KL1Q5T9C9 394 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 AFMIDQ63HM1 303 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 ARHGAP36Q6ZRI8 547 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 DSG4Q86SJ6 1040 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 ARHGAP12Q8IWW6 846 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 PCDH20Q8N6Y1 951 aaKnown RBP13.93□□□□□ -0.18
SNX6-203ENST00000555416 TC2NQ8N9U0 490 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 OR2T34Q8NGX1 318 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 CEP76Q8TAP6 659 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 ZNF564Q8TBZ8 553 aaPredicted RBP13.93□□□□□ -0.18
SNX6-203ENST00000555416 HSPH1Q92598 858 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 GTPBP2Q9BX10 602 aaKnown RBP13.93□□□□□ -0.18
SNX6-203ENST00000555416 CEP44Q9C0F1 390 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 SLC39A8Q9C0K1 460 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 CATSPERBQ9H7T0 1116 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 TM9SF3Q9HD45 589 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 OSGEPQ9NPF4 335 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 TMEM9BQ9NQ34 198 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 IP6K2Q9UHH9 426 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 DOCK9Q9BZ29 2069 aa13.93□□□□□ -0.18
SNX6-203ENST00000555416 A0A1B0GTW7 788 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 A0A1B0GVT2 93 aa13.92□□□□□ -0.18
SNX6-203ENST00000555416 AKR1B15C9JRZ8 316 aaPredicted RBP13.92□□□□□ -0.18
SNX6-203ENST00000555416 KPNA3O00505 521 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms