RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 KAT7O95251 611 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 ASGR2P07307 311 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 DLDP09622 509 aaKnown RBP14.76□□□□□ -0.05
SHMT2-210ENST00000553950 DRD1P21728 446 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 CA4P22748 312 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 TNNT3P45378 269 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-210ENST00000553950 GDF10P55107 478 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 WASHC5Q12768 1159 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 ZBTB17Q13105 803 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 GEN1Q17RS7 908 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 ANKRD20A2Q5SQ80 823 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 ANKRD20A1Q5TYW2 823 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 ANKRD20A3Q5VUR7 823 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 ALG1LQ6GMV1 187 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 TRMT11Q7Z4G4 463 aaKnown RBP14.76□□□□□ -0.05
SHMT2-210ENST00000553950 ADIPOR2Q86V24 386 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 UBALD2Q8IYN6 164 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 APCDD1Q8J025 514 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 PHTF2Q8N3S3 785 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 PCDH20Q8N6Y1 951 aaKnown RBP14.76□□□□□ -0.05
SHMT2-210ENST00000553950 ST13P5Q8NFI4 369 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-210ENST00000553950 KCNV2Q8TDN2 545 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 SNF8Q96H20 258 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 TEKT5Q96M29 485 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 MGME1Q9BQP7 344 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 ERP44Q9BS26 406 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 PRDM6Q9NQX0 595 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 FAM114A2Q9NRY5 505 aa14.76□□□□□ -0.05
SHMT2-210ENST00000553950 RBM22Q9NW64 420 aaKnown RBP eCLIP14.76□□□□□ -0.051e-9■■■■□ 20
SHMT2-210ENST00000553950 INTS6Q9UL03 887 aaKnown RBP14.76□□□□□ -0.05
SHMT2-210ENST00000553950 TBC1D3BA6NDS4 549 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 C19orf67A6NJJ6 358 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 PSMD3O43242 534 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 SNAP91O60641 907 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 IGSF6O95976 241 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 PEX11BO96011 259 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 JCHAINP01591 159 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 ADCY8P40145 1251 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 TNFRSF4P43489 277 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 DRG2P55039 364 aaKnown RBP14.75□□□□□ -0.05
SHMT2-210ENST00000553950 RHOAP61586 193 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 CAV1Q03135 178 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 PRKCQQ04759 706 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 GRSF1Q12849 480 aaKnown RBP eCLIP14.75□□□□□ -0.05
SHMT2-210ENST00000553950 GPS1Q13098 491 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 CUL1Q13616 776 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 GRM3Q14832 879 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 PARP6Q2NL67 630 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 FBXO43Q4G163 708 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 ASTLQ6HA08 431 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-210ENST00000553950 CEP128Q6ZU80 1094 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 PID1Q7Z2X4 250 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 HOOK3Q86VS8 718 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 IFT20Q8IY31 132 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 ZNF567Q8N184 647 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 SH2D3CQ8N5H7 860 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 ATP11CQ8NB49 1132 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 NETO2Q8NC67 525 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 GDAP1L1Q96MZ0 367 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 ASB2Q96Q27 587 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 LRRC1Q9BTT6 524 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 FRMD8Q9BZ67 464 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-210ENST00000553950 EIF2B3Q9NR50 452 aaKnown RBP14.75□□□□□ -0.05
SHMT2-210ENST00000553950 VPS45Q9NRW7 570 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 ELOVL2Q9NXB9 296 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 PLA2G4CQ9UP65 541 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 ATP8A1Q9Y2Q0 1164 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 AAR2Q9Y312 384 aaKnown RBP14.75□□□□□ -0.05
SHMT2-210ENST00000553950 NEU2Q9Y3R4 380 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 TTLL3Q9Y4R7 772 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 CKAP5Q14008 2032 aa14.75□□□□□ -0.05
SHMT2-210ENST00000553950 E7EVH7 732 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 AP3B1O00203 1094 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 GSRP00390 522 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 HLA-DQB2P05538 268 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 GLDCP23378 1020 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 RECQLP46063 649 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-210ENST00000553950 GEMP55040 296 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 AP1S1P61966 158 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 SNRPD1P62314 119 aaKnown RBP14.74□□□□□ -0.05
SHMT2-210ENST00000553950 BASP1P80723 227 aaKnown RBP14.74□□□□□ -0.05
SHMT2-210ENST00000553950 CDK16Q00536 496 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 NSUN2Q08J23 767 aaKnown RBP eCLIP14.74□□□□□ -0.05
SHMT2-210ENST00000553950 SLC10A7Q0GE19 358 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 MLF2Q15773 248 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-210ENST00000553950 HSF5Q4G112 596 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-210ENST00000553950 C22orf39Q6P5X5 142 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 PPP1R21Q6ZMI0 780 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 PLPP6Q8IY26 295 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 GPR161Q8N6U8 529 aaKnown RBP14.74□□□□□ -0.05
SHMT2-210ENST00000553950 EIF1ADQ8N9N8 165 aaKnown RBP14.74□□□□□ -0.05
SHMT2-210ENST00000553950 MYRIPQ8NFW9 859 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 CCDC110Q8TBZ0 833 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 SEC14L1Q92503 715 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 SHDQ96IW2 340 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 AGAP3Q96P47 875 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 FCRL5Q96RD9 977 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 TRIM51Q9BSJ1 452 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 SLC25A51Q9H1U9 297 aa14.74□□□□□ -0.05
SHMT2-210ENST00000553950 GLOD4Q9HC38 313 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms