RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 PRR5LQ6MZQ0 368 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ZFP82Q8N141 532 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ATAD1Q8NBU5 361 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 AKR7LQ8NHP1 331 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 UTP15Q8TED0 518 aaKnown RBP9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 C2CD4CQ8TF44 421 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 FAM167AQ96KS9 214 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 BTBD9Q96Q07 612 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 SEPHS2Q99611 448 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 DCLK3Q9C098 648 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 PPIL3Q9H2H8 161 aaKnown RBP9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 TTYH1Q9H313 450 aaPredicted RBP9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 GPAMQ9HCL2 828 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 CPQQ9Y646 472 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 TNKSO95271 1327 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 CYP3A7-CYP3A51PA0A087WV96 503 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 TEX51A0A1B0GUA7 166 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ARHGEF33A8MVX0 844 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 TEX46H3BTG2 121 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 KCNN4O15554 427 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 OR2B3O76000 313 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 OR52Z1P0C646 297 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 CCNYL3P0C7X3 344 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 CYP3A7P24462 503 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 HNMTP50135 292 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 SSTP61278 116 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 CDKL1Q00532 357 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 GIT2Q14161 759 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ZNF568Q3ZCX4 644 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 HERC6Q8IVU3 1022 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 PDIK1LQ8N165 341 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 LARP4BQ92615 738 aaKnown RBP9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 GLTPQ9NZD2 209 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 PCDHB2Q9Y5E7 798 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 TRBV23-1A0A0A0MS06 115 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 POM121CA8CG34 1229 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ITGB3P05106 788 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 GDI1P31150 447 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 PRKAR1BP31321 381 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 INPP5AQ14642 412 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 GALNTL6Q49A17 601 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 KRT28Q7Z3Y7 464 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC13A5Q86YT5 568 aaPredicted RBP9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 HID1Q8IV36 788 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 AVL9Q8NBF6 648 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ZNF564Q8TBZ8 553 aaPredicted RBP9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 TCP10LQ8TDR4 215 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 DPF3Q92784 378 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 TMEM121Q9BTD3 319 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 LGR6Q9HBX8 967 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 CYP4F12Q9HCS2 524 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 PSMC3IPQ9P2W1 217 aaPredicted RBP9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 CDC40O60508 579 aaKnown RBP eCLIP9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 CCNDBP1O95273 360 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 MUTP22033 750 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 TFAMQ00059 246 aaKnown RBP9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 BMPR2Q13873 1038 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 TBCELQ5QJ74 424 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 TRIQKQ629K1 86 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 NANOGP8Q6NSW7 305 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ZNF517Q6ZMY9 492 aaPredicted RBP9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ATP6V0D2Q8N8Y2 350 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 WDSUB1Q8N9V3 476 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 GPRASP2Q96D09 838 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 NOL11Q9H8H0 719 aaKnown RBP9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ZFP57Q9NU63 452 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC7A8Q9UHI5 535 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ADAMTS6Q9UKP5 1117 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 CLCA2Q9UQC9 943 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ZNF536O15090 1300 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC26A3P40879 764 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 OPRL1P41146 370 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 MCCD1P59942 119 aaPredicted RBP9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 S100A12P80511 92 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 DPYDQ12882 1025 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 UHRF1BP1Q6BDS2 1440 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ASRGL1Q7L266 308 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ANKLE2Q86XL3 938 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC2A14Q8TDB8 520 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 FBXW5Q969U6 566 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 CRB3Q9BUF7 120 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 HDHD2Q9H0R4 259 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 FOXP1Q9H334 677 aaPredicted RBP9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 C12orf10Q9HB07 376 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ATP13A2Q9NQ11 1180 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 SLC38A7Q9NVC3 462 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 SH3BGRL2Q9UJC5 107 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 HRH3Q9Y5N1 445 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 MAU2Q9Y6X3 613 aa9.12□□□□□ -0.95
GTF2A1-203ENST00000553612 ABCB11O95342 1321 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 MAP3K15Q6ZN16 1313 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 RARGP13631 454 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 CYP4F2P78329 520 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 CYP4F3Q08477 520 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 SPDYE7PQ495Y7 208 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 ABRAXAS1Q6UWZ7 409 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 CCBE1Q6UXH8 406 aaPredicted RBP9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 MAMSTRQ6ZN01 415 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 TNS4Q8IZW8 715 aa9.11□□□□□ -0.95
GTF2A1-203ENST00000553612 STX19Q8N4C7 294 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms