RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	PCDH19	Q8TAB3	1148 aa		11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	RFFL	Q8WZ73	363 aa		11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	EIF3C	Q99613	913 aa	Known RBP	11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	ORAI3	Q9BRQ5	295 aa		11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	MAGEH1	Q9H213	219 aa		11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	NEUROG2	Q9H2A3	272 aa		11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	EBF2	Q9HAK2	575 aa		11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	TMEM51	Q9NW97	253 aa		11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	NCDN	Q9UBB6	729 aa		11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	LHX3	Q9UBR4	397 aa		11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	SLC25A13	Q9UJS0	675 aa		11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	PPM1H	Q9ULR3	514 aa		11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	WASF2	Q9Y6W5	498 aa		11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	SPAG17	Q6Q759	2223 aa		11.44	□□□□□ -0.58
RAB5B-208	ENST00000550283	TTC24	A2A3L6	582 aa	Predicted RBP	11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	WNT9A	O14904	365 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	TMCC1	O94876	653 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	PEX11B	O96011	259 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	MPL	P40238	635 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	CDH6	P55285	790 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	TAS2R38	P59533	333 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	KRT83	P78385	493 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	CREB5	Q02930	508 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	CNTN1	Q12860	1018 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	ACAP1	Q15027	740 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	TCEAL1	Q15170	157 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	LLGL1	Q15334	1064 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	PSTK	Q8IV42	348 aa	Known RBP	11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	PQLC3	Q8N755	202 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	GRIN3A	Q8TCU5	1115 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	TEKT4	Q8WW24	435 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	PDLIM2	Q96JY6	352 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	EXOC2	Q96KP1	924 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	HSPA12B	Q96MM6	686 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	CAAP1	Q9H8G2	361 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	SEMA4G	Q9NTN9	838 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	BAHCC1	Q9P281	2608 aa		11.43	□□□□□ -0.58
RAB5B-208	ENST00000550283	PTPRZ1	P23471	2315 aa	Predicted RBP	11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	NUP205	Q92621	2012 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	MCF2L	O15068	1137 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	FGF10	O15520	208 aa	Predicted RBP	11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	SPINT1	O43278	529 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	MAP3K13	O43283	966 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	BUB1	O43683	1085 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	MFSD11	O43934	449 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	PRAMEF11	O60813	436 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	IL1B	P01584	269 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	TNNT1	P13805	278 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	ITIH2	P19823	946 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	COMT	P21964	271 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	CHRNA3	P32297	505 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	MAN1A1	P33908	653 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	HCAR3	P49019	387 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	CCNH	P51946	323 aa	Predicted RBP	11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	PPP2CB	P62714	309 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	PPP2CA	P67775	309 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	ZNF33A	Q06730	810 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	SLC10A2	Q12908	348 aa	Predicted RBP	11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	ELAVL3	Q14576	367 aa	Known RBP	11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	IHH	Q14623	411 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	BOLA3	Q53S33	107 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	ARSI	Q5FYB1	569 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	AGBL4	Q5VU57	503 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	NCBP2-AS2	Q69YL0	99 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	LAYN	Q6UX15	382 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	LPCAT2	Q7L5N7	544 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	TMTC1	Q8IUR5	882 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	CCDC170	Q8IYT3	715 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	HDDC3	Q8N4P3	179 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	OR2I1P	Q8NGU4	316 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	PIP4K2C	Q8TBX8	421 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	PIGK	Q92643	395 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	KRT35	Q92764	455 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	FAM131C	Q96AQ9	280 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	SPACA7	Q96KW9	195 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	BAG1	Q99933	345 aa	Predicted RBP	11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	HINFP	Q9BQA5	517 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	HERPUD2	Q9BSE4	406 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	CATSPERB	Q9H7T0	1116 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	FBXL12	Q9NXK8	326 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	RAB23	Q9ULC3	237 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	INTU	Q9ULD6	942 aa		11.42	□□□□□ -0.58
RAB5B-208	ENST00000550283	GON4L	Q3T8J9	2241 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	CEP192	Q8TEP8	1941 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283		H3BRJ5	948 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	DFFA	O00273	331 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	DAPK3	O43293	454 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	ZNF217	O75362	1048 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	LEFTY1	O75610	366 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	RNASEH2A	O75792	299 aa	Known RBP	11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	RHOBTB1	O94844	696 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	DNTT	P04053	509 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	IGHV4-34	P06331	123 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	PTMA	P06454	111 aa	Known RBP	11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	ACADM	P11310	421 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	ETFB	P38117	255 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	DNA2	P51530	1060 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	NDST2	P52849	883 aa		11.41	□□□□□ -0.58
RAB5B-208	ENST00000550283	YBEY	P58557	167 aa	Predicted RBP	11.41	□□□□□ -0.58

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