RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 NFKBIBQ15653 356 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 PIP5KL1Q5T9C9 394 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 TXNRD3NBQ6F5E7 133 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 C22orf39Q6P5X5 142 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 TP53INP2Q8IXH6 220 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 RTL3Q8N8U3 475 aaKnown RBP12.05□□□□□ -0.48
LETMD1-221ENST00000550100 RNF214Q8ND24 703 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 OR2T34Q8NGX1 318 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 ZNF653Q96CK0 615 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 SLC6A18Q96N87 628 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 PPP1R9BQ96SB3 815 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 KCTD15Q96SI1 283 aaPredicted RBP12.05□□□□□ -0.48
LETMD1-221ENST00000550100 SNRNP25Q9BV90 132 aaKnown RBP12.05□□□□□ -0.48
LETMD1-221ENST00000550100 THAP2Q9H0W7 228 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 DNAAF2Q9NVR5 837 aaKnown RBP12.05□□□□□ -0.48
LETMD1-221ENST00000550100 FZD4Q9ULV1 537 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 FNDC3AQ9Y2H6 1198 aaKnown RBP12.05□□□□□ -0.48
LETMD1-221ENST00000550100 MFHAS1Q9Y4C4 1052 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 ASPMQ8IZT6 3477 aa12.05□□□□□ -0.48
LETMD1-221ENST00000550100 A0A1W2PPC4 97 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 LRCH4O75427 683 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 SERPING1P05155 500 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 GNSP15586 552 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 EPHB2P29323 1055 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 MAPKAPK2P49137 400 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 NOVA1P51513 510 aaKnown RBP12.04□□□□□ -0.48
LETMD1-221ENST00000550100 TPM4P67936 248 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 HLA-BQ31612 363 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 EFHC2Q5JST6 749 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 PRAMEF14Q5SWL7 426 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 LRSAM1Q6UWE0 723 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 OR6K2Q8NGY2 324 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 GRIN3AQ8TCU5 1115 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 HMCESQ96FZ2 354 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.04□□□□□ -0.48
LETMD1-221ENST00000550100 TSPY26PQ9H489 355 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 CA5BQ9Y2D0 317 aa12.04□□□□□ -0.48
LETMD1-221ENST00000550100 LUC7L2Q9Y383 392 aaKnown RBP12.04□□□□□ -0.48
LETMD1-221ENST00000550100 TBC1D3DA0A087WVF3 549 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 TBC1D3IA0A087WXS9 549 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 TBC1D3EA0A087X179 549 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 TBC1D3KA0A087X1G2 549 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 SPAARA0A1B0GVQ0 90 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 A0A1W2PR77 199 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 TBC1D3FA6NER0 549 aaPredicted RBP12.03□□□□□ -0.48
LETMD1-221ENST00000550100 WASH4PA8MWX3 477 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 TBC1D3LB9A6J9 549 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 ALOX15BO15296 676 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 LATO43561 262 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 PLRG1O43660 514 aaKnown RBP12.03□□□□□ -0.48
LETMD1-221ENST00000550100 KDELR3O43731 214 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 SH3BP5O60239 455 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 LEFTY1O75610 366 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 TBC1D3HP0C7X1 549 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 MAT2AP31153 395 aaKnown RBP12.03□□□□□ -0.48
LETMD1-221ENST00000550100 EIF4A3P38919 411 aaKnown RBP12.03□□□□□ -0.48
LETMD1-221ENST00000550100 DNA2P51530 1060 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 CCR5P51681 352 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 POLD3Q15054 466 aaPredicted RBP12.03□□□□□ -0.48
LETMD1-221ENST00000550100 TDRD12Q587J7 1177 aaKnown RBP12.03□□□□□ -0.48
LETMD1-221ENST00000550100 ATXN7L2Q5T6C5 722 aaPredicted RBP12.03□□□□□ -0.48
LETMD1-221ENST00000550100 TBC1D3GQ6DHY5 549 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 TBC1D3CQ6IPX1 549 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 RABEPKQ7Z6M1 372 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 TBC1D3Q8IZP1 549 aaPredicted RBP12.03□□□□□ -0.48
LETMD1-221ENST00000550100 TMIEQ8NEW7 156 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 KLK6Q92876 244 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 PACSIN1Q9BY11 444 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 TM6SF2Q9BZW4 377 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 MAGEH1Q9H213 219 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 DHX35Q9H5Z1 703 aaKnown RBP12.03□□□□□ -0.48
LETMD1-221ENST00000550100 GAREM1Q9H706 876 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 LRRC19Q9H756 370 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 OSGEPQ9NPF4 335 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 SUSD2Q9UGT4 822 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 AP4E1Q9UPM8 1137 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 WASF3Q9UPY6 502 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 ANKRD6Q9Y2G4 727 aa12.03□□□□□ -0.48
LETMD1-221ENST00000550100 ANKRD62A6NC57 917 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 UPK3BL1B0FP48 263 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 RASA4BC9J798 803 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 UPK3BL2E5RIL1 263 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 J3KR12 359 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 KPNA3O00505 521 aaPredicted RBP12.02□□□□□ -0.48
LETMD1-221ENST00000550100 INSIG1O15503 277 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 RASA4O43374 803 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 OPHN1O60890 802 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 RAMP2O60895 175 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 CYP1A2P05177 515 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 SYPP08247 313 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 CSRP1P21291 193 aaKnown RBP12.02□□□□□ -0.48
LETMD1-221ENST00000550100 HNRNPH3P31942 346 aaKnown RBP12.02□□□□□ -0.48
LETMD1-221ENST00000550100 CTSKP43235 329 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 CLCN6P51797 869 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 AFF3P51826 1226 aaKnown RBP12.02□□□□□ -0.48
LETMD1-221ENST00000550100 CCNHP51946 323 aaPredicted RBP12.02□□□□□ -0.48
LETMD1-221ENST00000550100 SLC20A2Q08357 652 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 SERINC3Q13530 473 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 CYTH1Q15438 398 aa12.02□□□□□ -0.48
LETMD1-221ENST00000550100 SHBQ15464 509 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms