RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 EPC1Q9H2F5 836 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 IPO11Q9UI26 975 aaKnown RBP17.14■□□□□ 0.33
LTBR-215ENST00000546296 GUCA1BQ9UMX6 200 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 NCKAP1Q9Y2A7 1128 aa17.14■□□□□ 0.33
LTBR-215ENST00000546296 GRID2IPA4D2P6 1211 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 ALOX15BO15296 676 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 NDUFS2O75306 463 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 RHOBTB1O94844 696 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 ZRANB2O95218 330 aaKnown RBP eCLIP17.13■□□□□ 0.33
LTBR-215ENST00000546296 ADH1BP00325 375 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 LMNAP02545 664 aaKnown RBP17.13■□□□□ 0.33
LTBR-215ENST00000546296 OXTRP30559 389 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 CHRNA3P32297 505 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 SLC8A1P32418 973 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 IL10RBQ08334 325 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 ELF2Q15723 593 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 FAM46CQ5VWP2 391 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 SLC36A4Q6YBV0 504 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 PEX26Q7Z412 305 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 FAM124AQ86V42 546 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 KBTBD6Q86V97 674 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 TP53INP2Q8IXH6 220 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 KATNAL2Q8IYT4 538 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 RCOR2Q8IZ40 523 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 ATPAF2Q8N5M1 289 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 OR2A12Q8NGT7 310 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 ISG20Q96AZ6 181 aaKnown RBP17.13■□□□□ 0.33
LTBR-215ENST00000546296 FAF2Q96CS3 445 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 OMDQ99983 421 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 TM6SF2Q9BZW4 377 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 PABPC3Q9H361 631 aaKnown RBP17.13■□□□□ 0.33
LTBR-215ENST00000546296 USP36Q9P275 1121 aaKnown RBP17.13■□□□□ 0.33
LTBR-215ENST00000546296 AMFRQ9UKV5 643 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 SCML1Q9UN30 329 aa17.13■□□□□ 0.33
LTBR-215ENST00000546296 SMG5Q9UPR3 1016 aaKnown RBP17.13■□□□□ 0.33
LTBR-215ENST00000546296 MUC22E2RYF6 1773 aaPredicted RBP17.12■□□□□ 0.33
LTBR-215ENST00000546296 IGHV1OR15-9A0A0B4J2B8 117 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 C3orf70A6NLC5 250 aaPredicted RBP17.12■□□□□ 0.33
LTBR-215ENST00000546296 ZNF487B1APH4 448 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 PROB1E7EW31 1015 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 C1QTNF3-AMACRE9PGA6 284 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 APOL1O14791 398 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 MID1O15344 667 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 TMCC1O94876 653 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 ZFXP17010 805 aaPredicted RBP17.12■□□□□ 0.33
LTBR-215ENST00000546296 BCKDHBP21953 392 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 CD6P30203 668 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 RHOAP61586 193 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 SNRPD1P62314 119 aaKnown RBP17.12■□□□□ 0.33
LTBR-215ENST00000546296 PAFAH1B3Q15102 231 aaKnown RBP17.12■□□□□ 0.33
LTBR-215ENST00000546296 PLK5Q496M5 336 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 NCBP2-AS2Q69YL0 99 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 MFSD7Q6UXD7 560 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 DPY19L3Q6ZPD9 716 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 ARHGAP36Q6ZRI8 547 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 LPCAT2Q7L5N7 544 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 VSIG1Q86XK7 387 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 CCDC50Q8IVM0 306 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 PQLC3Q8N755 202 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 LRRC57Q8N9N7 239 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 CHST14Q8NCH0 376 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 NSMCE1Q8WV22 266 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 KRT35Q92764 455 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 CD93Q9NPY3 652 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 LZTFL1Q9NQ48 299 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 FBXL12Q9NXK8 326 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 HECAQ9UBI9 543 aaPredicted RBP17.12■□□□□ 0.33
LTBR-215ENST00000546296 IL36AQ9UHA7 158 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 MBD1Q9UIS9 605 aaPredicted RBP17.12■□□□□ 0.33
LTBR-215ENST00000546296 PCDHA3Q9Y5H8 950 aa17.12■□□□□ 0.33
LTBR-215ENST00000546296 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 CCDC66A2RUB6 948 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 MFSD11O43934 449 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 ZNF821O75541 412 aaPredicted RBP17.11■□□□□ 0.33
LTBR-215ENST00000546296 RNASEH2AO75792 299 aaKnown RBP17.11■□□□□ 0.33
LTBR-215ENST00000546296 GSRP00390 522 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 PRNPP04156 253 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 C5AR1P21730 350 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 CTNNA1P35221 906 aaKnown RBP17.11■□□□□ 0.33
LTBR-215ENST00000546296 MARCKSL1P49006 195 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 CCNHP51946 323 aaPredicted RBP17.11■□□□□ 0.33
LTBR-215ENST00000546296 DYNLT1P63172 113 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 RPL6Q02878 288 aaKnown RBP17.11■□□□□ 0.33
LTBR-215ENST00000546296 CYTH1Q15438 398 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 POM121L1PQ3SYA9 428 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 ARSIQ5FYB1 569 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 KAZNQ674X7 775 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 SPOCD1Q6ZMY3 1216 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 LRRC49Q8IUZ0 686 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 PLPP6Q8IY26 295 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 TMEFF1Q8IYR6 380 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 HDDC3Q8N4P3 179 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 OR2AP1Q8NGE2 309 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 EXD1Q8NHP7 514 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 PIP4K2CQ8TBX8 421 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 GRIN3AQ8TCU5 1115 aa17.11■□□□□ 0.33
LTBR-215ENST00000546296 TOE1Q96GM8 510 aaKnown RBP17.11■□□□□ 0.33
LTBR-215ENST00000546296 RBM41Q96IZ5 413 aaKnown RBP17.11■□□□□ 0.33
LTBR-215ENST00000546296 ZC3H10Q96K80 434 aaKnown RBP17.11■□□□□ 0.33
LTBR-215ENST00000546296 ZNF830Q96NB3 372 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms