RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ZCCHC18P0CG32 403 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 CSH1P0DML2 217 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 CSH2P0DML3 217 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 PAX3P23760 479 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 IVDP26440 423 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 SCNN1AP37088 669 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 RENBPP51606 427 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 OXCT1P55809 520 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 GAD2Q05329 585 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 AAGABQ6PD74 315 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 TRAF7Q6Q0C0 670 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 OLFML1Q6UWY5 402 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 DHDDSQ86SQ9 333 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 PLD3Q8IV08 490 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ZDHHC14Q8IZN3 488 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ZNF567Q8N184 647 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 MPP5Q8N3R9 675 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 FAM81AQ8TBF8 368 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 PYDC1Q8WXC3 89 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 IRGQQ8WZA9 623 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 BEGAINQ9BUH8 593 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 NMUR2Q9GZQ4 415 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 XYLT2Q9H1B5 865 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 NMRK1Q9NWW6 199 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 COPG2Q9UBF2 871 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 PRKAG3Q9UGI9 489 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 TRMT6Q9UJA5 497 aaKnown RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 PRG3Q9Y2Y8 225 aaPredicted RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 RAP2CQ9Y3L5 183 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 PHIPQ8WWQ0 1821 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 FOCADQ5VW36 1801 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 SLC12A8A0AV02 714 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 PRR5-ARHGAP8B1AHC4 643 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 BTBD19C9JJ37 291 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 M0R3G1 203 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ABLIM1O14639 778 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 UGT1A9O60656 530 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 AP2A1O95782 977 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 OAS1P00973 400 aaKnown RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 LMO2P25791 158 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 CDC25CP30307 473 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 SERPINH1P50454 418 aaKnown RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 ARHGAP8P85298 464 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ZNF252P-AS1Q0IIN9 211 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 SOWAHAQ2M3V2 549 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 INTS6LQ5JSJ4 861 aaKnown RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 PRMT9Q6P2P2 845 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ZNF467Q7Z7K2 595 aaPredicted RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 NUP93Q8N1F7 819 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 OR6Y1Q8NGX8 325 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 PRPF18Q99633 342 aaKnown RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 ECSITQ9BQ95 431 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 RTKNQ9BST9 563 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 CADM1Q9BY67 442 aaKnown RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 CAB39LQ9H9S4 337 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 UGT1A7Q9HAW7 530 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 UGT1A10Q9HAW8 530 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 UGT1A8Q9HAW9 530 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ZMYND8Q9ULU4 1186 aaPredicted RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 TEX264Q9Y6I9 313 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 COL11A2P13942 1736 aaPredicted RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 FAM159BA6NKW6 160 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 NR5A2O00482 541 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 RTN3O95197 1032 aaPredicted RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 CLPTM1O96005 669 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 TPBGLP0DKB5 382 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 PROZP22891 400 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 PSMA4P25789 261 aaKnown RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 POLD2P49005 469 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ATXN1P54253 815 aaKnown RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 SLC18A2Q05940 514 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 FASTKQ14296 549 aaKnown RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 SQLEQ14534 574 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 AARS2Q5JTZ9 985 aaKnown RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 ZNF280DQ6N043 979 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 TFAP2DQ7Z6R9 452 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 TMEM110Q86TL2 294 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 MIB1Q86YT6 1006 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 RIN3Q8TB24 985 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 KCTD4Q8WVF5 259 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 ZNF512Q96ME7 567 aaPredicted RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 RGS18Q9NS28 235 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 IGSF9Q9P2J2 1179 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 CYTH4Q9UIA0 394 aa5.87□□□□□ -1.47
VPS50-220ENST00000544910 CORO1CQ9ULV4 474 aaPredicted RBP5.87□□□□□ -1.47
VPS50-220ENST00000544910 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 ZNF487B1APH4 448 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 TYROBPO43914 113 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 EIF2S1P05198 315 aaKnown RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 LTA4HP09960 611 aaKnown RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 PTPN3P26045 913 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 PRDX6P30041 224 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 DAB2P98082 770 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 PLOD1Q02809 727 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 ZNF177Q13360 481 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 MSLNQ13421 630 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 AASDHQ4L235 1098 aaPredicted RBP5.86□□□□□ -1.47
VPS50-220ENST00000544910 CERCAMQ5T4B2 595 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 RFWD3Q6PCD5 774 aa5.86□□□□□ -1.47
VPS50-220ENST00000544910 FBXW8Q8N3Y1 598 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms