RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 ALG13Q9NP73 1137 aaKnown RBP10.03□□□□□ -0.8
SS18-205ENST00000542420 PRDM5Q9NQX1 630 aaPredicted RBP10.03□□□□□ -0.8
SS18-205ENST00000542420 ARL8BQ9NVJ2 186 aa10.03□□□□□ -0.8
SS18-205ENST00000542420 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.03□□□□□ -0.8
SS18-205ENST00000542420 STK38LQ9Y2H1 464 aa10.03□□□□□ -0.8
SS18-205ENST00000542420 C15orf41Q9Y2V0 281 aa10.03□□□□□ -0.8
SS18-205ENST00000542420 PSAT1Q9Y617 370 aa10.03□□□□□ -0.8
SS18-205ENST00000542420 TMEM88BA6NKF7 163 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 E9PAM4 449 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 GYG2O15488 501 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 HOXA2O43364 376 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 AMHP03971 560 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 HOXB8P17481 243 aaPredicted RBP10.02□□□□□ -0.8
SS18-205ENST00000542420 CRABP2P29373 138 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 CCND3P30281 292 aaPredicted RBP10.02□□□□□ -0.8
SS18-205ENST00000542420 ADSLP30566 484 aaPredicted RBP10.02□□□□□ -0.8
SS18-205ENST00000542420 TRIP4Q15650 581 aaPredicted RBP10.02□□□□□ -0.8
SS18-205ENST00000542420 TP53INP2Q8IXH6 220 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 ZNF683Q8IZ20 524 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 CCDC33Q8N5R6 958 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 TEX26Q8N6G2 289 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 SPPL2BQ8TCT7 592 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 PDCD6IPQ8WUM4 868 aaKnown RBP10.02□□□□□ -0.8
SS18-205ENST00000542420 CASP10Q92851 521 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 VPS39Q96JC1 886 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 FCRL2Q96LA5 508 aaPredicted RBP10.02□□□□□ -0.8
SS18-205ENST00000542420 GLT1D1Q96MS3 346 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 AGAP3Q96P47 875 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 TMEM175Q9BSA9 504 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 MECRQ9BV79 373 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 CADM1Q9BY67 442 aaKnown RBP10.02□□□□□ -0.8
SS18-205ENST00000542420 ATP13A1Q9HD20 1204 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 C20orf96Q9NUD7 363 aaPredicted RBP10.02□□□□□ -0.8
SS18-205ENST00000542420 CPSF2Q9P2I0 782 aaKnown RBP10.02□□□□□ -0.8
SS18-205ENST00000542420 CACNG4Q9UBN1 327 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 DNAJB4Q9UDY4 337 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 RIMKLBQ9ULI2 386 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 TRIM33Q9UPN9 1127 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 TCAF1Q9Y4C2 921 aa10.02□□□□□ -0.8
SS18-205ENST00000542420 A0A087X1B8 175 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 A0A096LPK6 155 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 SPECC1L-ADORA2AF8WAN1 911 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 PEX11AO75192 247 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 PEX19P40855 299 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 RENBPP51606 427 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 AQP5P55064 265 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 YBEYP58557 167 aaPredicted RBP10.02□□□□□ -0.81
SS18-205ENST00000542420 CRADDP78560 199 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 NOGQ13253 232 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 ZNF280DQ6N043 979 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 ZC3HC1Q86WB0 502 aaKnown RBP10.02□□□□□ -0.81
SS18-205ENST00000542420 TEX9Q8N6V9 391 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 TRIM56Q9BRZ2 755 aaKnown RBP10.02□□□□□ -0.81
SS18-205ENST00000542420 CEP41Q9BYV8 373 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 SLC39A8Q9C0K1 460 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 TREX1Q9NSU2 369 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 TMEM216Q9P0N5 145 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 SRRDQ9UH36 339 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 NR2E3Q9Y5X4 410 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 ANKRD36A6QL64 1941 aa10.02□□□□□ -0.81
SS18-205ENST00000542420 HEATR9A2RTY3 570 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 DRGXA6NNA5 263 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 ENO4A6NNW6 628 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 H7C4K7 107 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 TRIM13O60858 407 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 IGLV3-27P01718 113 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 MAPKAPK2P49137 400 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 SP3Q02447 781 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 TUBB3Q13509 450 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 SLC12A1Q13621 1099 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 C5orf22Q49AR2 442 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 HSF5Q4G112 596 aaPredicted RBP10.01□□□□□ -0.81
SS18-205ENST00000542420 CLLU1OSQ5K130 101 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 RABGAP1LQ5R372 815 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 CERCAMQ5T4B2 595 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 TMCO4Q5TGY1 634 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 DENND5AQ6IQ26 1287 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 RWDD4Q6NW29 188 aaKnown RBP10.01□□□□□ -0.81
SS18-205ENST00000542420 RANBP10Q6VN20 620 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 ZYG11AQ6WRX3 759 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 UNC5BQ8IZJ1 945 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 OVCA2Q8WZ82 227 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 TADA1Q96BN2 335 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 BTN2A3PQ96KV6 586 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 ZNF599Q96NL3 588 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 FAM193BQ96PV7 902 aaPredicted RBP10.01□□□□□ -0.81
SS18-205ENST00000542420 MIPEPQ99797 713 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 RHOBTB2Q9BYZ6 727 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 ZYG11BQ9C0D3 744 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 ARHGAP39Q9C0H5 1083 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 NMUR2Q9GZQ4 415 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 TAS2R1Q9NYW7 299 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 VTI1BQ9UEU0 232 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 CORO1CQ9ULV4 474 aaPredicted RBP10.01□□□□□ -0.81
SS18-205ENST00000542420 INPP5FQ9Y2H2 1132 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 HS3ST4Q9Y661 456 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 A0A1W2PQH9 124 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 DFFAO00273 331 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 C2P06681 752 aa10.01□□□□□ -0.81
SS18-205ENST00000542420 FESP07332 822 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms