RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 FAM131CQ96AQ9 280 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 HMCESQ96FZ2 354 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 TM6SF2Q9BZW4 377 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 TRIM5Q9C035 493 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 EBF2Q9HAK2 575 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 FZD4Q9ULV1 537 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 SLC6A14Q9UN76 642 aa15.38■□□□□ 0.05
UBE3B-212ENST00000540230 CACNA1AO00555 2505 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 DOCK9Q9BZ29 2069 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 ASCC3Q8N3C0 2202 aaKnown RBP15.37■□□□□ 0.05
UBE3B-212ENST00000540230 SSU72P8A0A1W2PR75 194 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 RASA4BC9J798 803 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 EEF2KO00418 725 aaKnown RBP15.37■□□□□ 0.05
UBE3B-212ENST00000540230 ALOX15BO15296 676 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 RASA4O43374 803 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 CHRNA3P32297 505 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 PCK1P35558 622 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 CNTN1Q12860 1018 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 PPP6R3Q5H9R7 873 aaPredicted RBP15.37■□□□□ 0.05
UBE3B-212ENST00000540230 AGBL4Q5VU57 503 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 KIAA0895LQ68EN5 471 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.37■□□□□ 0.05
UBE3B-212ENST00000540230 DGLUCYQ7Z3D6 616 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 CEP76Q8TAP6 659 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 GRIN3AQ8TCU5 1115 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 VOPP1Q96AW1 172 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 ARRDC3Q96B67 414 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 CELF6Q96J87 481 aaKnown RBP15.37■□□□□ 0.05
UBE3B-212ENST00000540230 PCED1AQ9H1Q7 454 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 CATSPERBQ9H7T0 1116 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 TMEM9BQ9NQ34 198 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 SPTLC3Q9NUV7 552 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 WASF2Q9Y6W5 498 aa15.37■□□□□ 0.05
UBE3B-212ENST00000540230 SPTBN2O15020 2390 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 SPEGQ15772 3267 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 FGF10O15520 208 aaPredicted RBP15.36■□□□□ 0.05
UBE3B-212ENST00000540230 KDELR3O43731 214 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 SDHBP21912 280 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 GKP32189 559 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 ETFBP38117 255 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 PPP2CBP62714 309 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 PPP2CAP67775 309 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 BNC1Q01954 994 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 SLC25A11Q02978 314 aaKnown RBP15.36■□□□□ 0.05
UBE3B-212ENST00000540230 SLC20A2Q08357 652 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 ARSIQ5FYB1 569 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 LAYNQ6UX15 382 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 RFX8Q6ZV50 586 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 DSG4Q86SJ6 1040 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 ZNF354CQ86Y25 554 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 UMODL1-AS1Q8N2C9 162 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 PCDH20Q8N6Y1 951 aaKnown RBP15.36■□□□□ 0.05
UBE3B-212ENST00000540230 NPWQ8N729 165 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 NIPA2Q8N8Q9 360 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 OR6K2Q8NGY2 324 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 OR14C36Q8NHC7 312 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 ZNF564Q8TBZ8 553 aaPredicted RBP15.36■□□□□ 0.05
UBE3B-212ENST00000540230 GTPBP2Q9BX10 602 aaKnown RBP15.36■□□□□ 0.05
UBE3B-212ENST00000540230 CEP44Q9C0F1 390 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 DEF6Q9H4E7 631 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 LRRC19Q9H756 370 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 ZWILCHQ9H900 591 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 CWC15Q9P013 229 aaKnown RBP15.36■□□□□ 0.05
UBE3B-212ENST00000540230 MFHAS1Q9Y4C4 1052 aa15.36■□□□□ 0.05
UBE3B-212ENST00000540230 A0A1B0GTW7 788 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 C1QTNF3-AMACRE9PGA6 284 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 KPNA3O00505 521 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-212ENST00000540230 BCAT2O15382 392 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-212ENST00000540230 LEFTY1O75610 366 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 TPM1P09493 284 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 RARAP10276 462 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 ERCC2P18074 760 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 DNA2P51530 1060 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 CCNHP51946 323 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-212ENST00000540230 TAS2R38P59533 333 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 GRIK2Q13002 908 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 SERINC3Q13530 473 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 PIGHQ14442 188 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-212ENST00000540230 ACAP1Q15027 740 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 PIP5KL1Q5T9C9 394 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 FAM46CQ5VWP2 391 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 TP53INP2Q8IXH6 220 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 TC2NQ8N9U0 490 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 OR2T34Q8NGX1 318 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 HSPH1Q92598 858 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 SLC39A8Q9C0K1 460 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 NHEJ1Q9H9Q4 299 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-212ENST00000540230 OSGEPQ9NPF4 335 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 ZNHIT6Q9NWK9 470 aaKnown RBP15.35■□□□□ 0.05
UBE3B-212ENST00000540230 SUSD2Q9UGT4 822 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 IL36AQ9UHA7 158 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 IP6K2Q9UHH9 426 aa15.35■□□□□ 0.05
UBE3B-212ENST00000540230 CNOT1A5YKK6 2376 aaKnown RBP15.35■□□□□ 0.05
UBE3B-212ENST00000540230 TP53BP1Q12888 1972 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-212ENST00000540230 TMEM131Q92545 1883 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 AKR1B15C9JRZ8 316 aaPredicted RBP15.34■□□□□ 0.05
UBE3B-212ENST00000540230 ARHGAP33O14559 1287 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 PLRG1O43660 514 aaKnown RBP15.34■□□□□ 0.05
UBE3B-212ENST00000540230 BUB1O43683 1085 aa15.34■□□□□ 0.05
UBE3B-212ENST00000540230 AKR1B10O60218 316 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms