RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 HOMER3Q9NSC5 361 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 SAMD15Q9P1V8 674 aa12.56□□□□□ -0.4
SCARB1-204ENST00000535005 OTOL1A6NHN0 477 aaPredicted RBP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 H0Y626 953 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 NCAM2O15394 837 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 MFSD11O43934 449 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 RAMP2O60895 175 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 AGTP01019 485 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 RHOCP08134 193 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 PECAM1P16284 738 aaPredicted RBP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 MX2P20592 715 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 MMP13P45452 471 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 PLK1P53350 603 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 GALNT2Q10471 571 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 DHX34Q14147 1143 aaKnown RBP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 NOMO1Q15155 1222 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 CCNG2Q16589 344 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 PARP15Q460N3 678 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 C1orf228Q6PIY5 440 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 KIAA0907Q7Z7F0 614 aaPredicted RBP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 MFN1Q8IWA4 741 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 ETFBKMTQ8IXQ9 262 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 ACTL9Q8TC94 416 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 DNASE1L2Q92874 299 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 ALG14Q96F25 216 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 SLC39A8Q9C0K1 460 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 BRD8Q9H0E9 1235 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 PLK2Q9NYY3 685 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 KIAA1522Q9P206 1035 aaPredicted RBP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 CLEC4EQ9ULY5 219 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 R3HDM2Q9Y2K5 976 aaKnown RBP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 OR51B4Q9Y5P0 310 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 RASA4BC9J798 803 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 RASA4O43374 803 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 CISD3P0C7P0 127 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 BMP1P13497 986 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 ETFBP38117 255 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 EIF2DP41214 584 aaKnown RBP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 OTUD4Q01804 1114 aaKnown RBP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 GNA12Q03113 381 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 ZNF33AQ06730 810 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 TDGQ13569 410 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 CDH18Q13634 790 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 PDK1Q15118 436 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 CYP1B1Q16678 543 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 FSCBQ5H9T9 825 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 DRICH1Q6PGQ1 229 aaPredicted RBP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 NPNTQ6UXI9 565 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 APLFQ8IW19 511 aaPredicted RBP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 PRELID2Q8N945 189 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 OR52K2Q8NGK3 314 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 SLC35B2Q8TB61 432 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 WFDC5Q8TCV5 224 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 BHMTQ93088 406 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 NKD2Q969F2 451 aaPredicted RBP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 TSGA13Q96PP4 275 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 ASB2Q96Q27 587 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 FMO2Q99518 471 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 SLC2A4RGQ9NR83 387 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 GTSE1Q9NYZ3 720 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 NOP53Q9NZM5 478 aaKnown RBP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 SAE1Q9UBE0 346 aaPredicted RBP12.55□□□□□ -0.4
SCARB1-204ENST00000535005 SLC27A6Q9Y2P4 619 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 HEY1Q9Y5J3 304 aa12.55□□□□□ -0.4
SCARB1-204ENST00000535005 ARHGAP42A6NI28 874 aa12.54□□□□□ -0.4
SCARB1-204ENST00000535005 ASGR2P07307 311 aa12.54□□□□□ -0.4
SCARB1-204ENST00000535005 GJA4P35212 333 aa12.54□□□□□ -0.4
SCARB1-204ENST00000535005 DHX9Q08211 1270 aaKnown RBP12.54□□□□□ -0.4
SCARB1-204ENST00000535005 POLD3Q15054 466 aaPredicted RBP12.54□□□□□ -0.4
SCARB1-204ENST00000535005 ADAT2Q7Z6V5 191 aaKnown RBP12.54□□□□□ -0.4
SCARB1-204ENST00000535005 C12orf50Q8NA57 414 aaPredicted RBP12.54□□□□□ -0.4
SCARB1-204ENST00000535005 CSGALNACT1Q8TDX6 532 aa12.54□□□□□ -0.4
SCARB1-204ENST00000535005 ARHGEF2Q92974 986 aaKnown RBP12.54□□□□□ -0.4
SCARB1-204ENST00000535005 CELF6Q96J87 481 aaKnown RBP12.54□□□□□ -0.4
SCARB1-204ENST00000535005 FEM1AQ9BSK4 669 aa12.54□□□□□ -0.4
SCARB1-204ENST00000535005 ACE2Q9BYF1 805 aaPredicted RBP12.54□□□□□ -0.4
SCARB1-204ENST00000535005 PABPC3Q9H361 631 aaKnown RBP12.54□□□□□ -0.4
SCARB1-204ENST00000535005 BCCIPQ9P287 314 aaKnown RBP eCLIP12.54□□□□□ -0.4
SCARB1-204ENST00000535005 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.54□□□□□ -0.4
SCARB1-204ENST00000535005 C15orf41Q9Y2V0 281 aa12.54□□□□□ -0.4
SCARB1-204ENST00000535005 CXorf51AA0A1B0GTR3 108 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 HACD1B0YJ81 288 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 LIASO43766 372 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 TULP3O75386 442 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 ZNF189O75820 626 aaPredicted RBP12.53□□□□□ -0.4
SCARB1-204ENST00000535005 SRFP11831 508 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 HLA-FP30511 346 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 GARSP41250 739 aaKnown RBP12.53□□□□□ -0.4
SCARB1-204ENST00000535005 PAPOLAP51003 745 aaKnown RBP12.53□□□□□ -0.4
SCARB1-204ENST00000535005 PFKPQ01813 784 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 LMAN2Q12907 356 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 SERINC3Q13530 473 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 DMC1Q14565 340 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 PPP1R7Q15435 360 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 RNF219Q5W0B1 726 aaPredicted RBP12.53□□□□□ -0.4
SCARB1-204ENST00000535005 ASTLQ6HA08 431 aaPredicted RBP12.53□□□□□ -0.4
SCARB1-204ENST00000535005 HIBCHQ6NVY1 386 aaPredicted RBP12.53□□□□□ -0.4
SCARB1-204ENST00000535005 TP53INP2Q8IXH6 220 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 FATE1Q969F0 183 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms