RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 PREBQ9HCU5 417 aa9.11□□□□□ -0.95
COPB1-211ENST00000534234 PPARGC1AQ9UBK2 798 aaKnown RBP9.11□□□□□ -0.95
COPB1-211ENST00000534234 ZNF212Q9UDV6 495 aa9.11□□□□□ -0.95
COPB1-211ENST00000534234 LIMA1Q9UHB6 759 aaKnown RBP9.11□□□□□ -0.95
COPB1-211ENST00000534234 RALYQ9UKM9 306 aaKnown RBP9.11□□□□□ -0.95
COPB1-211ENST00000534234 A0A1W2PQU0 124 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 C2CD4BA6NLJ0 364 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 GOLGA6L22H0YM25 854 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 RNF103O00237 685 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 SLC31A1O15431 190 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 ZNF821O75541 412 aaPredicted RBP9.1□□□□□ -0.95
COPB1-211ENST00000534234 LEFTY1O75610 366 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 PCDH8O95206 1070 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 GJB6O95452 261 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 LDOC1O95751 146 aaPredicted RBP9.1□□□□□ -0.95
COPB1-211ENST00000534234 EPHA8P29322 1005 aaPredicted RBP9.1□□□□□ -0.95
COPB1-211ENST00000534234 RFC1P35251 1148 aaPredicted RBP9.1□□□□□ -0.95
COPB1-211ENST00000534234 PTPN9P43378 593 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 NSFP46459 744 aaKnown RBP9.1□□□□□ -0.95
COPB1-211ENST00000534234 RXRGP48443 463 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 SERPINH1P50454 418 aaKnown RBP9.1□□□□□ -0.95
COPB1-211ENST00000534234 MYL5Q02045 173 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 CARD16Q5EG05 197 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 RWDD4Q6NW29 188 aaKnown RBP9.1□□□□□ -0.95
COPB1-211ENST00000534234 C22orf39Q6P5X5 142 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 WDR59Q6PJI9 974 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 DHRS13Q6UX07 377 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 ERN2Q76MJ5 926 aaKnown RBP9.1□□□□□ -0.95
COPB1-211ENST00000534234 STRADAQ7RTN6 431 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 PROSER1Q86XN7 944 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 MARCH9Q86YJ5 346 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 GALNT15Q8N3T1 639 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 OXR1Q8N573 874 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 EID2Q8N6I1 236 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 GRIN3AQ8TCU5 1115 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 CENPIQ92674 756 aaPredicted RBP9.1□□□□□ -0.95
COPB1-211ENST00000534234 KLK6Q92876 244 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 KLHDC7BQ96G42 594 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 HEPHQ9BQS7 1158 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 MAGEB5Q9BZ81 275 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 OSBPL2Q9H1P3 480 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 CCDC86Q9H6F5 360 aaKnown RBP9.1□□□□□ -0.95
COPB1-211ENST00000534234 ADAM22Q9P0K1 906 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 IL36AQ9UHA7 158 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 CA5BQ9Y2D0 317 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 NUMA1Q14980 2115 aa9.1□□□□□ -0.95
COPB1-211ENST00000534234 FAM149AA5PLN7 773 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 LGALS16A8MUM7 142 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 FAM72CH0Y354 149 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 HAX1O00165 279 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 ENC1O14682 589 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 CD160O95971 181 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 PLEKP08567 350 aaPredicted RBP9.09□□□□□ -0.95
COPB1-211ENST00000534234 PRLRP16471 622 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 RHOQP17081 205 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 ACVRL1P37023 503 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 ARF5P84085 180 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 NRG1Q02297 640 aaPredicted RBP9.09□□□□□ -0.95
COPB1-211ENST00000534234 PTP4A2Q12974 167 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 STX1AQ16623 288 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 CLEC16AQ2KHT3 1053 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 FAM72AQ5TYM5 149 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 FAM72DQ6L9T8 149 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 HORMAD1Q86X24 394 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 FAM72BQ86X60 149 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 PHF13Q86YI8 300 aaPredicted RBP9.09□□□□□ -0.95
COPB1-211ENST00000534234 PCDH20Q8N6Y1 951 aaKnown RBP9.09□□□□□ -0.95
COPB1-211ENST00000534234 MDM1Q8TC05 714 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 FAM172AQ8WUF8 416 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 PPP1R16AQ96I34 528 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 CNDP2Q96KP4 475 aaKnown RBP9.09□□□□□ -0.95
COPB1-211ENST00000534234 MYOCQ99972 504 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 SELENOOQ9BVL4 669 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 HDAC8Q9BY41 377 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 CEP44Q9C0F1 390 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 RETREG1Q9H6L5 497 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 NDFIP2Q9NV92 336 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 SEPT11Q9NVA2 429 aaKnown RBP9.09□□□□□ -0.95
COPB1-211ENST00000534234 DNAI1Q9UI46 699 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 FCF1Q9Y324 198 aaKnown RBP9.09□□□□□ -0.95
COPB1-211ENST00000534234 ACTL7AQ9Y615 435 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 WASF2Q9Y6W5 498 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 AKAP13Q12802 2813 aa9.09□□□□□ -0.95
COPB1-211ENST00000534234 TRABD2BA6NFA1 517 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 SIGLEC16A6NMB1 481 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 LRIG2O94898 1065 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 CALB1P05937 261 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 THEGLP0DJG4 465 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 GPD1P21695 349 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 ETFBP38117 255 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 MAPKAPK2P49137 400 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 CCNHP51946 323 aaPredicted RBP9.08□□□□□ -0.96
COPB1-211ENST00000534234 HDAC4P56524 1084 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 DNAJC3Q13217 504 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 NCAPHQ15003 741 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 SMAD1Q15797 465 aaKnown RBP9.08□□□□□ -0.96
COPB1-211ENST00000534234 ZNF284Q2VY69 593 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 MANEALQ5VSG8 457 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 SFMBT2Q5VUG0 894 aa9.08□□□□□ -0.96
COPB1-211ENST00000534234 FBXL19Q6PCT2 694 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms