RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 A0A1B0GTW7 788 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 SSU72P8A0A1W2PR75 194 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 FAM47DPA6NHR8 397 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 LRRC72A6NJI9 287 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 C4orf47A7E2U8 309 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 EEF2KO00418 725 aaKnown RBP15.68■□□□□ 0.1
CPSF1-210ENST00000532935 PLK4O00444 970 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 CDX4O14627 284 aaPredicted RBP15.68■□□□□ 0.1
CPSF1-210ENST00000532935 KDELR3O43731 214 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 MFAP3LO75121 409 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 ZNF821O75541 412 aaPredicted RBP15.68■□□□□ 0.1
CPSF1-210ENST00000532935 FSBPO95073 299 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 CTSLP07711 333 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 CHRNA3P32297 505 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 ADPRHP54922 357 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 GEMIN4P57678 1058 aaKnown RBP15.68■□□□□ 0.1
CPSF1-210ENST00000532935 MAPK8IP2Q13387 824 aaPredicted RBP15.68■□□□□ 0.1
CPSF1-210ENST00000532935 PIGHQ14442 188 aaPredicted RBP15.68■□□□□ 0.1
CPSF1-210ENST00000532935 ASTE1Q2TB18 679 aaPredicted RBP15.68■□□□□ 0.1
CPSF1-210ENST00000532935 POM121L1PQ3SYA9 428 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 KIAA0895LQ68EN5 471 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 NCEH1Q6PIU2 408 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.68■□□□□ 0.1
CPSF1-210ENST00000532935 ERMP1Q7Z2K6 904 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 PCDH20Q8N6Y1 951 aaKnown RBP15.68■□□□□ 0.1
CPSF1-210ENST00000532935 CHST14Q8NCH0 376 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 OR2T34Q8NGX1 318 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 OR14C36Q8NHC7 312 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 BIRC7Q96CA5 298 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 BTBD6Q96KE9 485 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 TRIM5Q9C035 493 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 DEF6Q9H4E7 631 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 ANAPC7Q9UJX3 599 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 FCF1Q9Y324 198 aaKnown RBP15.68■□□□□ 0.1
CPSF1-210ENST00000532935 SPTBN2O15020 2390 aa15.68■□□□□ 0.1
CPSF1-210ENST00000532935 KNL1Q8NG31 2342 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 RASA4BC9J798 803 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 ARHGAP33O14559 1287 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 TM4SF5O14894 197 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 BCAT2O15382 392 aaPredicted RBP15.67■□□□□ 0.1
CPSF1-210ENST00000532935 RASA4O43374 803 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 IGHV4-34P06331 123 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 SYPP08247 313 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 MAPK8P45983 427 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 RECQLP46063 649 aaPredicted RBP15.67■□□□□ 0.1
CPSF1-210ENST00000532935 YBEYP58557 167 aaPredicted RBP15.67■□□□□ 0.1
CPSF1-210ENST00000532935 TBX2Q13207 712 aaPredicted RBP15.67■□□□□ 0.1
CPSF1-210ENST00000532935 PARP15Q460N3 678 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 PPP6R3Q5H9R7 873 aaPredicted RBP15.67■□□□□ 0.1
CPSF1-210ENST00000532935 DPY19L3Q6ZPD9 716 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 ZNF354CQ86Y25 554 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 UMODL1-AS1Q8N2C9 162 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 NIPA2Q8N8Q9 360 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 TMIEQ8NEW7 156 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 C1orf216Q8TAB5 229 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 FAM131CQ96AQ9 280 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 ISG20Q96AZ6 181 aaKnown RBP15.67■□□□□ 0.1
CPSF1-210ENST00000532935 HMCESQ96FZ2 354 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 CHP1Q99653 195 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 GTPBP2Q9BX10 602 aaKnown RBP15.67■□□□□ 0.1
CPSF1-210ENST00000532935 DONSONQ9NYP3 566 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 IL36AQ9UHA7 158 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 IP6K2Q9UHH9 426 aa15.67■□□□□ 0.1
CPSF1-210ENST00000532935 ANKRD36A6QL64 1941 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 SHROOM3Q8TF72 1996 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 ZSCAN5CA6NGD5 496 aaPredicted RBP15.66■□□□□ 0.1
CPSF1-210ENST00000532935 C10orf142B7Z368 130 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 MYO1FO00160 1098 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 SLC7A4O43246 635 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 AKR1B10O60218 316 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 PRNPP04156 253 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 TCF4P15884 667 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 CD27P26842 260 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 IL1R2P27930 398 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 DNA2P51530 1060 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 ZNF135P52742 658 aaPredicted RBP15.66■□□□□ 0.1
CPSF1-210ENST00000532935 ATXN3P54252 364 aaPredicted RBP15.66■□□□□ 0.1
CPSF1-210ENST00000532935 CNTN1Q12860 1018 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 SERINC3Q13530 473 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 BOLA3Q53S33 107 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 CARD16Q5EG05 197 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 ARSIQ5FYB1 569 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 KCNT1Q5JUK3 1230 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 AGBL4Q5VU57 503 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 LEKR1Q6ZMV7 388 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 RFX8Q6ZV50 586 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 CNGA4Q8IV77 575 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 ZNF564Q8TBZ8 553 aaPredicted RBP15.66■□□□□ 0.1
CPSF1-210ENST00000532935 PACSIN1Q9BY11 444 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 KLC2Q9H0B6 622 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 RBSNQ9H1K0 784 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 KDM4CQ9H3R0 1056 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 LRRC19Q9H756 370 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 NHEJ1Q9H9Q4 299 aaPredicted RBP15.66■□□□□ 0.1
CPSF1-210ENST00000532935 SLCO1B1Q9Y6L6 691 aa15.66■□□□□ 0.1
CPSF1-210ENST00000532935 AKR1B15C9JRZ8 316 aaPredicted RBP15.65■□□□□ 0.1
CPSF1-210ENST00000532935 RNF103O00237 685 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 KPNA3O00505 521 aaPredicted RBP15.65■□□□□ 0.1
CPSF1-210ENST00000532935 DAPK3O43293 454 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 PLRG1O43660 514 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms