RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 DCAF12L1Q5VU92 463 aa21.14■□□□□ 0.97
CD44-222ENST00000526025 TIGD7Q6NT04 549 aaPredicted RBP21.14■□□□□ 0.97
CD44-222ENST00000526025 TP53INP2Q8IXH6 220 aa21.14■□□□□ 0.97
CD44-222ENST00000526025 HHIPQ96QV1 700 aa21.14■□□□□ 0.97
CD44-222ENST00000526025 TLR10Q9BXR5 811 aa21.14■□□□□ 0.97
CD44-222ENST00000526025 TCRBV21S2A2A0A5A6 115 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 J3KR12 359 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 APOC4-APOC2K7ER74 178 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 K7ERQ8 282 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 PPP1R12AO14974 1030 aaPredicted RBP21.13■□□□□ 0.97
CD44-222ENST00000526025 SMAD6O43541 496 aaKnown RBP21.13■□□□□ 0.97
CD44-222ENST00000526025 SIN3BO75182 1162 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 ZNF821O75541 412 aaPredicted RBP21.13■□□□□ 0.97
CD44-222ENST00000526025 TMCC1O94876 653 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 TJP3O95049 919 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 GSRP00390 522 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 APOC2P02655 101 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 CCNCP24863 283 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 COPAP53621 1224 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 ZBTB16Q05516 673 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 SLC10A2Q12908 348 aaPredicted RBP21.13■□□□□ 0.97
CD44-222ENST00000526025 ACCSLQ4AC99 568 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 ARHGAP36Q6ZRI8 547 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 ZNF366Q8N895 744 aa21.13■□□□□ 0.97
CD44-222ENST00000526025 RSPH9Q9H1X1 276 aaPredicted RBP21.13■□□□□ 0.97
CD44-222ENST00000526025 POLR3BQ9NW08 1133 aaPredicted RBP21.13■□□□□ 0.97
CD44-222ENST00000526025 MCF2LO15068 1137 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 PEX11BO96011 259 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 GABRG2P18507 467 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 HSPA9P38646 679 aaKnown RBP21.12■□□□□ 0.97
CD44-222ENST00000526025 CSTF1Q05048 431 aaKnown RBP21.12■□□□□ 0.97
CD44-222ENST00000526025 ADCY2Q08462 1091 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 PPIDQ08752 370 aaKnown RBP21.12■□□□□ 0.97
CD44-222ENST00000526025 ZNF569Q5MCW4 686 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 SEL1L2Q5TEA6 688 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 KAZNQ674X7 775 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 DSG4Q86SJ6 1040 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 OR2A12Q8NGT7 310 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 NSMCE1Q8WV22 266 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 MAML1Q92585 1016 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 P3H4Q92791 437 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 IRF2BPLQ9H1B7 796 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 AMACRQ9UHK6 382 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 FCF1Q9Y324 198 aaKnown RBP21.12■□□□□ 0.97
CD44-222ENST00000526025 FARP1Q9Y4F1 1045 aaPredicted RBP21.12■□□□□ 0.97
CD44-222ENST00000526025 HEY1Q9Y5J3 304 aa21.12■□□□□ 0.97
CD44-222ENST00000526025 RNASEH1O60930 286 aaKnown RBP21.11■□□□□ 0.97
CD44-222ENST00000526025 SP9P0CG40 484 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 NDUFV2P19404 249 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 RECQLP46063 649 aaPredicted RBP21.11■□□□□ 0.97
CD44-222ENST00000526025 SNRPD1P62314 119 aaKnown RBP21.11■□□□□ 0.97
CD44-222ENST00000526025 DYNLT1P63172 113 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 HNRNPDQ14103 355 aaKnown RBP21.11■□□□□ 0.97
CD44-222ENST00000526025 CARD16Q5EG05 197 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 ZNF776Q68DI1 518 aaPredicted RBP21.11■□□□□ 0.97
CD44-222ENST00000526025 Q6ZVU0 165 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 WDR5BQ86VZ2 330 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 TMPRSS6Q8IU80 811 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 NETO2Q8NC67 525 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 MDGA1Q8NFP4 955 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 OR2AP1Q8NGE2 309 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 OR8D1Q8WZ84 308 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 MRGPRX1Q96LB2 322 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 PSKH2Q96QS6 385 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 FAM129BQ96TA1 746 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 HEMGNQ9BXL5 484 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 MKRN2Q9H000 416 aaKnown RBP21.11■□□□□ 0.97
CD44-222ENST00000526025 SEPT3Q9UH03 358 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 SCML1Q9UN30 329 aa21.11■□□□□ 0.97
CD44-222ENST00000526025 MUC6Q6W4X9 2439 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 MATN3O15232 486 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 ZNF189O75820 626 aaPredicted RBP21.1■□□□□ 0.97
CD44-222ENST00000526025 VAV1P15498 845 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 CSNK1DP48730 415 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 RENBPP51606 427 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 NSUN2Q08J23 767 aaKnown RBP eCLIP21.1■□□□□ 0.97
CD44-222ENST00000526025 KLF1Q13351 362 aaPredicted RBP21.1■□□□□ 0.97
CD44-222ENST00000526025 ZNF211Q13398 564 aaPredicted RBP21.1■□□□□ 0.97
CD44-222ENST00000526025 XRCC4Q13426 336 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 LBRQ14739 615 aaKnown RBP21.1■□□□□ 0.97
CD44-222ENST00000526025 CYTH1Q15438 398 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 ANO7Q6IWH7 933 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 LONP2Q86WA8 852 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 SLC35F6Q8N357 371 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 BBS5Q8N3I7 341 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 TEX26Q8N6G2 289 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 TTC13Q8NBP0 860 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 HMGB4Q8WW32 186 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 LRIG1Q96JA1 1093 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 GDAP1L1Q96MZ0 367 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 HERPUD2Q9BSE4 406 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 MTG2Q9H4K7 406 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 HAUS2Q9NVX0 235 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 ZSCAN32Q9NX65 697 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 ACTL7AQ9Y615 435 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 ANKRD36A6QL64 1941 aa21.1■□□□□ 0.97
CD44-222ENST00000526025 HACD1B0YJ81 288 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 KCNK3O14649 394 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 AXIN1O15169 862 aa21.09■□□□□ 0.97
CD44-222ENST00000526025 IGSF6O95976 241 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms