RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SIGLEC14Q08ET2 396 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 DMWDQ09019 674 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 GALNT2Q10471 571 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 ZBTB17Q13105 803 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 SNX1Q13596 522 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 POLD3Q15054 466 aaPredicted RBP6.62□□□□□ -1.35
CD44-214ENST00000525211 NOMO1Q15155 1222 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 PTPRRQ15256 657 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 PPP2R5EQ16537 467 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 TFDP3Q5H9I0 405 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 TMEM31Q5JXX7 168 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 ATXN7L2Q5T6C5 722 aaPredicted RBP6.62□□□□□ -1.35
CD44-214ENST00000525211 IL31Q6EBC2 164 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 TMCO3Q6UWJ1 677 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 MICALCLQ6ZW33 695 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 SETD3Q86TU7 594 aaPredicted RBP6.62□□□□□ -1.35
CD44-214ENST00000525211 ZSCAN30Q86W11 494 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 CREG2Q8IUH2 290 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 UBALD2Q8IYN6 164 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 SYCE1Q8N0S2 351 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 RASGEF1CQ8N431 466 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 CNTD1Q8N815 330 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 TMEM105Q8N8V8 129 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 PRELID2Q8N945 189 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 CHST14Q8NCH0 376 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 PJA1Q8NG27 643 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 OR6K2Q8NGY2 324 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 RPLP0P6Q8NHW5 317 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 ACTL9Q8TC94 416 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 FOXJ1Q92949 421 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 CAPZA3Q96KX2 299 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 OLFM3Q96PB7 478 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 SMIM14Q96QK8 99 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 XPO6Q96QU8 1125 aaKnown RBP6.62□□□□□ -1.35
CD44-214ENST00000525211 NAPGQ99747 312 aaPredicted RBP6.62□□□□□ -1.35
CD44-214ENST00000525211 GORASP1Q9BQQ3 440 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 AP1M1Q9BXS5 423 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 SLC2A11Q9BYW1 496 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 CIPCQ9C0C6 399 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 MUC3BQ9H195 1237 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 TNKS2Q9H2K2 1166 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 CATSPERBQ9H7T0 1116 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 USP29Q9HBJ7 922 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 ATP13A1Q9HD20 1204 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 KIAA1522Q9P206 1035 aaPredicted RBP6.62□□□□□ -1.35
CD44-214ENST00000525211 RCOR3Q9P2K3 495 aaPredicted RBP6.62□□□□□ -1.35
CD44-214ENST00000525211 THAP10Q9P2Z0 257 aaPredicted RBP6.62□□□□□ -1.35
CD44-214ENST00000525211 LHX3Q9UBR4 397 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 IPO11Q9UI26 975 aaKnown RBP6.62□□□□□ -1.35
CD44-214ENST00000525211 LCMT1Q9UIC8 334 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 VPS28Q9UK41 221 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 JRKLQ9Y4A0 524 aa6.62□□□□□ -1.35
CD44-214ENST00000525211 ZDBF2Q9HCK1 2354 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 A0A0U1RQS6 177 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 A0A1W2PQF6 199 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 RNF223E7ERA6 249 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 KCNK1O00180 336 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 ATP9BO43861 1147 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 TMCC1O94876 653 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 FGGP02679 453 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 CTSLP07711 333 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 ZSCAN5DPP0CG00 497 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 RBL1P28749 1068 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 CD68P34810 354 aaPredicted RBP6.61□□□□□ -1.35
CD44-214ENST00000525211 EIF2DP41214 584 aaKnown RBP6.61□□□□□ -1.35
CD44-214ENST00000525211 GARSP41250 739 aaKnown RBP6.61□□□□□ -1.35
CD44-214ENST00000525211 TNFRSF4P43489 277 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 PXNP49023 591 aaPredicted RBP6.61□□□□□ -1.35
CD44-214ENST00000525211 NDST2P52849 883 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 MAXP61244 160 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 ECT2LQ008S8 904 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 SATB1Q01826 763 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 PRKCQQ04759 706 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 NIPAL4Q0D2K0 466 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 SLC10A7Q0GE19 358 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 WASHC5Q12768 1159 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 ENPP2Q13822 863 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 PRKD1Q15139 912 aaPredicted RBP6.61□□□□□ -1.35
CD44-214ENST00000525211 C9orf64Q5T6V5 341 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 TTC39BQ5VTQ0 682 aaPredicted RBP6.61□□□□□ -1.35
CD44-214ENST00000525211 TSSK4Q6SA08 328 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 ZNF852Q6ZMS4 543 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 Q6ZVU0 165 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 ZC3H18Q86VM9 953 aaKnown RBP6.61□□□□□ -1.35
CD44-214ENST00000525211 MAML2Q8IZL2 1156 aaPredicted RBP6.61□□□□□ -1.35
CD44-214ENST00000525211 AHI1Q8N157 1196 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 TXLNBQ8N3L3 684 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 SH2D3CQ8N5H7 860 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.61□□□□□ -1.35
CD44-214ENST00000525211 UBL4BQ8N7F7 174 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 DCAF4L2Q8NA75 395 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 ZNF511Q8NB15 262 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 TXNDC5Q8NBS9 432 aaKnown RBP6.61□□□□□ -1.35
CD44-214ENST00000525211 TSEN2Q8NCE0 465 aaKnown RBP6.61□□□□□ -1.35
CD44-214ENST00000525211 SLC35B2Q8TB61 432 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 MAML1Q92585 1016 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 PTPRN2Q92932 1015 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 CLDN23Q96B33 292 aa6.61□□□□□ -1.35
CD44-214ENST00000525211 TRIM44Q96DX7 344 aaPredicted RBP6.61□□□□□ -1.35
CD44-214ENST00000525211 RBM41Q96IZ5 413 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms