RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SMTNL1A8MU46 457 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 KPNA3O00505 521 aaPredicted RBP12.22□□□□□ -0.45
MED28-203ENST00000503945 SMAD6O43541 496 aaKnown RBP12.22□□□□□ -0.45
MED28-203ENST00000503945 TNFSF14O43557 240 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 LATO43561 262 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 PLRG1O43660 514 aaKnown RBP12.22□□□□□ -0.45
MED28-203ENST00000503945 DKK1O94907 266 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 ITGAVP06756 1048 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 MAT2AP31153 395 aaKnown RBP12.22□□□□□ -0.45
MED28-203ENST00000503945 RFC1P35251 1148 aaPredicted RBP12.22□□□□□ -0.45
MED28-203ENST00000503945 ETFBP38117 255 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 PTPN9P43378 593 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 GNA12Q03113 381 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 OVGP1Q12889 678 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 CLEC16AQ2KHT3 1053 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 C15orf59Q2T9L4 293 aaPredicted RBP12.22□□□□□ -0.45
MED28-203ENST00000503945 INAVAQ3KP66 663 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 ARSIQ5FYB1 569 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 NEK5Q6P3R8 708 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 LAYNQ6UX15 382 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 STRADAQ7RTN6 431 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 PHF13Q86YI8 300 aaPredicted RBP12.22□□□□□ -0.45
MED28-203ENST00000503945 DCAF4L2Q8NA75 395 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 OR7D4Q8NG98 312 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 CENPIQ92674 756 aaPredicted RBP12.22□□□□□ -0.45
MED28-203ENST00000503945 ELF4Q99607 663 aaPredicted RBP12.22□□□□□ -0.45
MED28-203ENST00000503945 AGPAT1Q99943 283 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 GDF3Q9NR23 364 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 ARHGAP20Q9P2F6 1191 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 BTBD3Q9Y2F9 522 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 RAXQ9Y2V3 346 aa12.22□□□□□ -0.45
MED28-203ENST00000503945 SHROOM3Q8TF72 1996 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 APC2O95996 2303 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 KNTC1P50748 2209 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 ASXL3Q9C0F0 2248 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 A0A1B0GTQ1 180 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 PRAMEF26H0Y7S4 382 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 WNT9AO14904 365 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 RNGTTO60942 597 aaKnown RBP12.21□□□□□ -0.45
MED28-203ENST00000503945 PCDH8O95206 1070 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 WNT1P04628 370 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 PLEKP08567 350 aaPredicted RBP12.21□□□□□ -0.45
MED28-203ENST00000503945 FERP16591 822 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 RHOQP17081 205 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 DESP17661 470 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 TNFAIP3P21580 790 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 GPD1P21695 349 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 METAP1P53582 386 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 NRG1Q02297 640 aaPredicted RBP12.21□□□□□ -0.45
MED28-203ENST00000503945 TYRO3Q06418 890 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
MED28-203ENST00000503945 NCAPHQ15003 741 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 FILIP1LQ4L180 1135 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 SETMARQ53H47 684 aaPredicted RBP12.21□□□□□ -0.45
MED28-203ENST00000503945 CARD16Q5EG05 197 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 NAPEPLDQ6IQ20 393 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 SCYL2Q6P3W7 929 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 WDR59Q6PJI9 974 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 SLFN11Q7Z7L1 901 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 TRIM69Q86WT6 500 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 DRC7Q8IY82 874 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 JOSD2Q8TAC2 188 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 FAM172AQ8WUF8 416 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 FAM131CQ96AQ9 280 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 PPP1R16AQ96I34 528 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 CEP44Q9C0F1 390 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 TNKS2Q9H2K2 1166 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 ERVMER34-1Q9H9K5 563 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 PREBQ9HCU5 417 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 IL36AQ9UHA7 158 aa12.21□□□□□ -0.45
MED28-203ENST00000503945 TP53BP1Q12888 1972 aaPredicted RBP12.21□□□□□ -0.46
MED28-203ENST00000503945 CXorf51AA0A1B0GTR3 108 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 A0A1W2PR77 199 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 TRABD2BA6NFA1 517 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 C10orf142B7Z368 130 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 YKT6O15498 198 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 GLDCP23378 1020 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 MAPKAPK2P49137 400 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 GEMIN4P57678 1058 aaKnown RBP12.2□□□□□ -0.46
MED28-203ENST00000503945 PPP2CBP62714 309 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 PPP2CAP67775 309 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 IL9RQ01113 521 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 CYP4F3Q08477 520 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 PTP4A2Q12974 167 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 RAB6CQ53S08 254 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 AGBL4Q5VU57 503 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 ACAD10Q6JQN1 1059 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 PPP1R2P3Q6NXS1 205 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 FBXL19Q6PCT2 694 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 DCUN1D2Q6PH85 259 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 DPY19L3Q6ZPD9 716 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 ERN2Q76MJ5 926 aaKnown RBP12.2□□□□□ -0.46
MED28-203ENST00000503945 IQCHQ86VS3 1027 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 OXR1Q8N573 874 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 AOPEPQ8N6M6 819 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 PCDH20Q8N6Y1 951 aaKnown RBP12.2□□□□□ -0.46
MED28-203ENST00000503945 C3orf20Q8ND61 904 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 KLHDC7BQ96G42 594 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 FEM1CQ96JP0 617 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 HEPHQ9BQS7 1158 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms