RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 HLA-EP13747 358 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 CCNB1P14635 433 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 PRKCHP24723 683 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 IL12RB1P42701 662 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 KIR2DL1P43626 348 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-227ENST00000498056 MMP13P45452 471 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 ZNF33AQ06730 810 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 SLC10A7Q0GE19 358 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 CCNG2Q16589 344 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 WHAMMP3Q1A5X7 153 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 DGKKQ5KSL6 1271 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 FAM182AQ5T1J6 154 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 TRIM67Q6ZTA4 783 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 Q6ZVU0 165 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 KLHL7Q8IXQ5 586 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 CCDC105Q8IYK2 499 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 ALLCQ8N6M5 410 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 C12orf50Q8NA57 414 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-227ENST00000498056 CCDC26Q8TAB7 109 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 HTR3CQ8WXA8 447 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 MAGOHBQ96A72 148 aaKnown RBP13.81□□□□□ -0.2
CPNE1-227ENST00000498056 MYO19Q96H55 970 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 ZNF599Q96NL3 588 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 TSGA13Q96PP4 275 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 ACOX2Q99424 681 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 DDX47Q9H0S4 455 aaKnown RBP13.81□□□□□ -0.2
CPNE1-227ENST00000498056 TNKS2Q9H2K2 1166 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 NT5MQ9NPB1 228 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 HOMER3Q9NSC5 361 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 KLHL8Q9P2G9 620 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-227ENST00000498056 THAP10Q9P2Z0 257 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-227ENST00000498056 SEPT3Q9UH03 358 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 SLCO3A1Q9UIG8 710 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 ZNF148Q9UQR1 794 aa13.81□□□□□ -0.2
CPNE1-227ENST00000498056 TTC28Q96AY4 2481 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 CFAP69A5D8W1 941 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 TTC34A8MYJ7 566 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 F5H423 210 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 MATN3O15232 486 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 MTSS1O43312 755 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 SMAD6O43541 496 aaKnown RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 CD160O95971 181 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 IGSF6O95976 241 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 PEX11BO96011 259 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 PDGFBP01127 241 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 IFNB1P01574 187 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 HLA-DQB2P05538 268 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 CHRNB1P11230 501 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 HOXB2P14652 356 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 NRLP54845 237 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 GDF10P55107 478 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 IFI35P80217 286 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 MRPS21P82921 87 aaKnown RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 ITKQ08881 620 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 RFTN1Q14699 578 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 E2F5Q15329 346 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 OASLQ15646 514 aaKnown RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 DLG2Q15700 870 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 ATXN7L2Q5T6C5 722 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 MARC1Q5VT66 337 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 CWF19L1Q69YN2 538 aaKnown RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 CCDC137Q6PK04 289 aaKnown RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 GSTA5Q7RTV2 222 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 METTL3Q86U44 580 aaKnown RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 CACUL1Q86Y37 369 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 RYBPQ8N488 228 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 FAM71DQ8N9W8 422 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 TXNDC5Q8NBS9 432 aaKnown RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 TSEN2Q8NCE0 465 aaKnown RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 OR6K2Q8NGY2 324 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 CASKIN2Q8WXE0 1202 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 MAML1Q92585 1016 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 NKD2Q969F2 451 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 ZNF419Q96HQ0 510 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-227ENST00000498056 GDAP1L1Q96MZ0 367 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 MTG2Q9H4K7 406 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 LMAN1LQ9HAT1 526 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 HAUS2Q9NVX0 235 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 LHX3Q9UBR4 397 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 HCN2Q9UL51 889 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 STARD13Q9Y3M8 1113 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 STON1Q9Y6Q2 735 aa13.8□□□□□ -0.2
CPNE1-227ENST00000498056 BDP1A6H8Y1 2624 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 A0A0A0MRY4 1105 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 EDDM13A0A1B0GTR0 161 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 BCLAF3A2AJT9 711 aaKnown RBP13.79□□□□□ -0.2
CPNE1-227ENST00000498056 TMEM221A6NGB7 291 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 WASH3PC4AMC7 463 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 CCDC188H7C350 402 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 M0R296 226 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 ZNF189O75820 626 aaPredicted RBP13.79□□□□□ -0.2
CPNE1-227ENST00000498056 JCHAINP01591 159 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 ITGAVP06756 1048 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 HNRNPLP14866 589 aaKnown RBP eCLIP13.79□□□□□ -0.2
CPNE1-227ENST00000498056 PTPN3P26045 913 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 NTSR1P30989 418 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 RECQLP46063 649 aaPredicted RBP13.79□□□□□ -0.2
CPNE1-227ENST00000498056 KCNJ1P48048 391 aa13.79□□□□□ -0.2
CPNE1-227ENST00000498056 FNTAP49354 379 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms