RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TRIM55Q9BYV6 548 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 MAGEB5Q9BZ81 275 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 OSBPL7Q9BZF2 842 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 PPP1R12CQ9BZL4 782 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 UBE2OQ9C0C9 1292 aaKnown RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 MANSC1Q9H8J5 431 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 MRM3Q9HC36 420 aaKnown RBP7.05□□□□□ -1.28
USP39-219ENST00000496047 CASS4Q9NQ75 786 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 TMPRSS4Q9NRS4 437 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 VPS45Q9NRW7 570 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 TXLNGQ9NUQ3 528 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 PCMTD2Q9NV79 361 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 TMEM30AQ9NV96 361 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 TMEM248Q9NWD8 314 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 SYBUQ9NX95 663 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 MTRRQ9UBK8 725 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 DCDC2Q9UHG0 476 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 SOX13Q9UN79 622 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 MFHAS1Q9Y4C4 1052 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 BACE2Q9Y5Z0 518 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 HS3ST4Q9Y661 456 aa7.05□□□□□ -1.28
USP39-219ENST00000496047 NUP210Q8TEM1 1887 aaPredicted RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 ABHD14A-ACY1A0A1B0GW23 586 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 A0A1W2PPM1 405 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 FAM92AA1XBS5 289 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 SLC38A8A6NNN8 435 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 F5H423 210 aaPredicted RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 FAM72CH0Y354 149 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 GOLGA8RI6L899 631 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 BIRC5O15392 142 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 ATP9BO43861 1147 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 TLR5O60602 858 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 EDF1O60869 148 aaKnown RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 RAMP2O60895 175 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 H2AFYO75367 372 aaKnown RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 OAS1P00973 400 aaKnown RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 JCHAINP01591 159 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 MPOP05164 745 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 CREB1P16220 341 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 TAC1P20366 129 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 TYK2P29597 1187 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 ATP5C1P36542 298 aaKnown RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 POLD2P49005 469 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 NEK3P51956 506 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 MLLT6P55198 1093 aaPredicted RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 ITKQ08881 620 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 NIPAL4Q0D2K0 466 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 ASPHQ12797 758 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 TAF10Q12962 218 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 ZBTB17Q13105 803 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 THOC5Q13769 683 aaKnown RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 HNRNPDQ14103 355 aaKnown RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 ZNF235Q14590 738 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 INSCQ1MX18 579 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 CCDC153Q494R4 210 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 LINC01559Q495D7 138 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 TTC31Q49AM3 519 aaPredicted RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 PCID2Q5JVF3 399 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 PLA2G2CQ5R387 149 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 STXBP5Q5T5C0 1151 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 FAM72AQ5TYM5 149 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 MARC1Q5VT66 337 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 C1orf53Q5VUE5 145 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 PTCRAQ6ISU1 281 aaPredicted RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 FAM72DQ6L9T8 149 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 C6orf89Q6UWU4 347 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 PACS1Q6VY07 963 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 SLC39A5Q6ZMH5 540 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 NLRP9Q7RTR0 991 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 DEFB128Q7Z7B8 93 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 SCD5Q86SK9 330 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 ITIH5Q86UX2 942 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 LCA5Q86VQ0 697 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 FAM72BQ86X60 149 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 IGDCC3Q8IVU1 814 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 NDUFAF2Q8N183 169 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 UMODL1-AS1Q8N2C9 162 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 MPP5Q8N3R9 675 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 ZNF276Q8N554 614 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 DENND1AQ8TEH3 1009 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 USP33Q8TEY7 942 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 PPP4R1Q8TF05 950 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 MZB1Q8WU39 189 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 ZNF75CPQ92670 426 aaPredicted RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 ZNF512Q96ME7 567 aaPredicted RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 RPRD1AQ96P16 312 aaPredicted RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 FAM111AQ96PZ2 611 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 RAB3IPQ96QF0 476 aaPredicted RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 SRPK1Q96SB4 655 aaKnown RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 IL12RB2Q99665 862 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 WDR83Q9BRX9 315 aaKnown RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 TUBB6Q9BUF5 446 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 HERC2P3Q9BVR0 1158 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 CEP41Q9BYV8 373 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 KIF9Q9HAQ2 790 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 NMUR1Q9HB89 426 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 RXFP1Q9HBX9 757 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 GLOD4Q9HC38 313 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.04□□□□□ -1.28
USP39-219ENST00000496047 C20orf96Q9NUD7 363 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms