RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 CARD16Q5EG05 197 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 PEAR1Q5VY43 1037 aaPredicted RBP17.69■□□□□ 0.42
MDC1-206ENST00000489540 POLNQ7Z5Q5 900 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 RGL4Q8IZJ4 473 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 ABCA7Q8IZY2 2146 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 HDDC3Q8N4P3 179 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 RFFLQ8WZ73 363 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 DNASE2BQ8WZ79 361 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 TNKS2Q9H2K2 1166 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 LRRC19Q9H756 370 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 LUC7LQ9NQ29 371 aaKnown RBP17.69■□□□□ 0.42
MDC1-206ENST00000489540 IMPACTQ9P2X3 320 aa17.69■□□□□ 0.42
MDC1-206ENST00000489540 FCF1Q9Y324 198 aaKnown RBP17.69■□□□□ 0.42
MDC1-206ENST00000489540 ARHGAP42A6NI28 874 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 MEI4A8MW99 385 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 ZNF821O75541 412 aaPredicted RBP17.68■□□□□ 0.42
MDC1-206ENST00000489540 KRT7P08729 469 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 SDHBP21912 280 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 FECHP22830 423 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 DNA2P51530 1060 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 KRT81Q14533 505 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 MESDQ14696 234 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 TXNRD3NBQ6F5E7 133 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 AADATQ8N5Z0 425 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 PIP4K2CQ8TBX8 421 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 TMEM74BQ9NUR3 256 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 RCOR3Q9P2K3 495 aaPredicted RBP17.68■□□□□ 0.42
MDC1-206ENST00000489540 SUSD2Q9UGT4 822 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 EVLQ9UI08 416 aaPredicted RBP17.68■□□□□ 0.42
MDC1-206ENST00000489540 SARDHQ9UL12 918 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.68■□□□□ 0.42
MDC1-206ENST00000489540 EML5Q05BV3 1969 aa17.68■□□□□ 0.42
MDC1-206ENST00000489540 LRRC72A6NJI9 287 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 SLC7A4O43246 635 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 GNSP15586 552 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 CDH6P55285 790 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 SF3A2Q15428 464 aaKnown RBP17.67■□□□□ 0.42
MDC1-206ENST00000489540 DUOXA1Q1HG43 343 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 DCAF12L1Q5VU92 463 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 AFMIDQ63HM1 303 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.67■□□□□ 0.42
MDC1-206ENST00000489540 DPY19L3Q6ZPD9 716 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 KCTD6Q8NC69 237 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 FAM71BQ8TC56 605 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 CELF6Q96J87 481 aaKnown RBP17.67■□□□□ 0.42
MDC1-206ENST00000489540 CSPG4P5Q96PW8 444 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 HEPHQ9BQS7 1158 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 SLC39A8Q9C0K1 460 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 KLC2Q9H0B6 622 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 SMOC1Q9H4F8 434 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 PCDH18Q9HCL0 1135 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 SERGEFQ9UGK8 458 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 IL36AQ9UHA7 158 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 PCDHA13Q9Y5I0 950 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 ACTL7AQ9Y615 435 aa17.67■□□□□ 0.42
MDC1-206ENST00000489540 EPN1Q9Y6I3 576 aaPredicted RBP17.67■□□□□ 0.42
MDC1-206ENST00000489540 TMEM110-MUSTN1A8MSY1 372 aa17.66■□□□□ 0.42
MDC1-206ENST00000489540 GSRP00390 522 aa17.66■□□□□ 0.42
MDC1-206ENST00000489540 PAPOLAP51003 745 aaKnown RBP17.66■□□□□ 0.42
MDC1-206ENST00000489540 SNRPD1P62314 119 aaKnown RBP17.66■□□□□ 0.42
MDC1-206ENST00000489540 PDK2Q15119 407 aa17.66■□□□□ 0.42
MDC1-206ENST00000489540 AASDHQ4L235 1098 aaPredicted RBP17.66■□□□□ 0.42
MDC1-206ENST00000489540 ARSIQ5FYB1 569 aa17.66■□□□□ 0.42
MDC1-206ENST00000489540 SLC23A3Q6PIS1 610 aa17.66■□□□□ 0.42
MDC1-206ENST00000489540 TMCO3Q6UWJ1 677 aa17.66■□□□□ 0.42
MDC1-206ENST00000489540 MAP7D3Q8IWC1 876 aa17.66■□□□□ 0.42
MDC1-206ENST00000489540 CHST14Q8NCH0 376 aa17.66■□□□□ 0.42
MDC1-206ENST00000489540 OR2T34Q8NGX1 318 aa17.66■□□□□ 0.42
MDC1-206ENST00000489540 TSC1Q92574 1164 aa17.66■□□□□ 0.42
MDC1-206ENST00000489540 FAM131CQ96AQ9 280 aa17.66■□□□□ 0.42
MDC1-206ENST00000489540 LRIG1Q96JA1 1093 aa17.66■□□□□ 0.42
MDC1-206ENST00000489540 NUSAP1Q9BXS6 441 aaKnown RBP17.66■□□□□ 0.42
MDC1-206ENST00000489540 KDM4CQ9H3R0 1056 aa17.66■□□□□ 0.42
MDC1-206ENST00000489540 C6orf106Q9H6K1 298 aaPredicted RBP17.66■□□□□ 0.42
MDC1-206ENST00000489540 HECAQ9UBI9 543 aaPredicted RBP17.66■□□□□ 0.42
MDC1-206ENST00000489540 TPX2Q9ULW0 747 aaKnown RBP17.66■□□□□ 0.42
MDC1-206ENST00000489540 PRAMEF11O60813 436 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 IPO7O95373 1038 aaKnown RBP17.65■□□□□ 0.42
MDC1-206ENST00000489540 CTSLP07711 333 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 AMPD1P23109 780 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 DRD3P35462 400 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 SLC1A1P43005 524 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 TRIM61Q5EBN2 209 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 LEKR1Q6ZMV7 388 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 ARHGAP12Q8IWW6 846 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 OR2AP1Q8NGE2 309 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 OR14C36Q8NHC7 312 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 NETO1Q8TDF5 533 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 PPP1R16AQ96I34 528 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 DYRK4Q9NR20 520 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 UBA2Q9UBT2 640 aaPredicted RBP17.65■□□□□ 0.42
MDC1-206ENST00000489540 SLC6A14Q9UN76 642 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.65■□□□□ 0.42
MDC1-206ENST00000489540 SPAG17Q6Q759 2223 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 DOCK4Q8N1I0 1966 aa17.65■□□□□ 0.42
MDC1-206ENST00000489540 FAM47DPA6NHR8 397 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 GOLGA6L6A8MZA4 724 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 DFFAO00273 331 aa17.64■□□□□ 0.42
MDC1-206ENST00000489540 KPNA3O00505 521 aaPredicted RBP17.64■□□□□ 0.42
MDC1-206ENST00000489540 LEFTY1O75610 366 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms