RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 CXorf51AA0A1B0GTR3 108 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 APOC4-APOC2K7ER74 178 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 CEP104O60308 925 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 ALDH1A2O94788 518 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 APBB3O95704 486 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 APOC2P02655 101 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 RECQLP46063 649 aaPredicted RBP12.99□□□□□ -0.33
PRDM2-208ENST00000487453 PXNP49023 591 aaPredicted RBP12.99□□□□□ -0.33
PRDM2-208ENST00000487453 NR2C2P49116 596 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 AP1B1Q10567 949 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 ZNF235Q14590 738 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 LBRQ14739 615 aaKnown RBP12.99□□□□□ -0.33
PRDM2-208ENST00000487453 PDK1Q15118 436 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 TMCO4Q5TGY1 634 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 KIAA1324Q6UXG2 1013 aaKnown RBP12.99□□□□□ -0.33
PRDM2-208ENST00000487453 BZW1Q7L1Q6 419 aaKnown RBP12.99□□□□□ -0.33
PRDM2-208ENST00000487453 ADAT2Q7Z6V5 191 aaKnown RBP12.99□□□□□ -0.33
PRDM2-208ENST00000487453 ZC3H18Q86VM9 953 aaKnown RBP12.99□□□□□ -0.33
PRDM2-208ENST00000487453 LRRC49Q8IUZ0 686 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 PCDH20Q8N6Y1 951 aaKnown RBP12.99□□□□□ -0.33
PRDM2-208ENST00000487453 FRS2Q8WU20 508 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 HMGB4Q8WW32 186 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 ZNF599Q96NL3 588 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 OLFM3Q96PB7 478 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 LGMNQ99538 433 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 FAM118BQ9BPY3 351 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 CEP44Q9C0F1 390 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 PRSS16Q9NQE7 514 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 PRMT8Q9NR22 394 aaPredicted RBP12.99□□□□□ -0.33
PRDM2-208ENST00000487453 SHROOM3Q8TF72 1996 aa12.99□□□□□ -0.33
PRDM2-208ENST00000487453 CKAP5Q14008 2032 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 TTC28Q96AY4 2481 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 TARSL2A2RTX5 802 aaKnown RBP12.98□□□□□ -0.33
PRDM2-208ENST00000487453 CD160O95971 181 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 IGSF6O95976 241 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 VASPP50552 380 aaPredicted RBP12.98□□□□□ -0.33
PRDM2-208ENST00000487453 OTUD4Q01804 1114 aaKnown RBP12.98□□□□□ -0.33
PRDM2-208ENST00000487453 CSTF1Q05048 431 aaKnown RBP12.98□□□□□ -0.33
PRDM2-208ENST00000487453 PPIDQ08752 370 aaKnown RBP12.98□□□□□ -0.33
PRDM2-208ENST00000487453 SLC10A7Q0GE19 358 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 CAMK2GQ13555 558 aaPredicted RBP12.98□□□□□ -0.33
PRDM2-208ENST00000487453 ELAVL3Q14576 367 aaKnown RBP12.98□□□□□ -0.33
PRDM2-208ENST00000487453 RFTN1Q14699 578 aaPredicted RBP12.98□□□□□ -0.33
PRDM2-208ENST00000487453 NOMO1Q15155 1222 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 ANGPT1Q15389 498 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 INO80DQ53TQ3 878 aaPredicted RBP12.98□□□□□ -0.33
PRDM2-208ENST00000487453 ATXN7L2Q5T6C5 722 aaPredicted RBP12.98□□□□□ -0.33
PRDM2-208ENST00000487453 HEATR6Q6AI08 1181 aaKnown RBP12.98□□□□□ -0.33
PRDM2-208ENST00000487453 B4GALNT4Q76KP1 1039 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 CCDC13Q8IYE1 715 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 STK40Q8N2I9 435 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 BBS5Q8N3I7 341 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 MDGA1Q8NFP4 955 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 OR2AP1Q8NGE2 309 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 OR6K2Q8NGY2 324 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 OR2T3Q8NH03 318 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 ACTL9Q8TC94 416 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 GRIN3AQ8TCU5 1115 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 OR8D1Q8WZ84 308 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 PTPRN2Q92932 1015 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 GDAP1L1Q96MZ0 367 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 WDR24Q96S15 920 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 NAPGQ99747 312 aaPredicted RBP12.98□□□□□ -0.33
PRDM2-208ENST00000487453 TPSD1Q9BZJ3 242 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 SLC6A17Q9H1V8 727 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 SEPT10Q9P0V9 454 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 FARP1Q9Y4F1 1045 aaPredicted RBP12.98□□□□□ -0.33
PRDM2-208ENST00000487453 TTLL3Q9Y4R7 772 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 ATG2BQ96BY7 2078 aa12.98□□□□□ -0.33
PRDM2-208ENST00000487453 TCRBV7S2A1N4TA0A589 114 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 CTAGE9A4FU28 777 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 H7C0C1 242 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 K7ESF4 209 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 KCNK1O00180 336 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 MCF2LO15068 1137 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 RNASEH1O60930 286 aaKnown RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 PAPSS2O95340 614 aaPredicted RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 GABRG2P18507 467 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 NDUFV2P19404 249 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 CCNCP24863 283 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 MMP13P45452 471 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 ATP5OP48047 213 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 PSMD8P48556 350 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 CCNHP51946 323 aaPredicted RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 COPAP53621 1224 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 EIF3EP60228 445 aaKnown RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 SNRPD1P62314 119 aaKnown RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 KLF1Q13351 362 aaPredicted RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 LONRF2Q1L5Z9 754 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 C9orf64Q5T6V5 341 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 MARC1Q5VT66 337 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 ZNF776Q68DI1 518 aaPredicted RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 DSG4Q86SJ6 1040 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 SLC13A5Q86YT5 568 aaPredicted RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 CAMKK1Q8N5S9 505 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 TTC13Q8NBP0 860 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 TSEN2Q8NCE0 465 aaKnown RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 OR2A12Q8NGT7 310 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 TFB1MQ8WVM0 346 aaKnown RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 PRCCQ92733 491 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms