RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 POM121L1PQ3SYA9 428 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 ISM2Q6H9L7 571 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 KLHL10Q6JEL2 608 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 TRIM65Q6PJ69 517 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 KDM7AQ6ZMT4 941 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 GCNT7Q6ZNI0 430 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 ERN2Q76MJ5 926 aaKnown RBP13.32□□□□□ -0.28
HDAC6-227ENST00000485102 ZNF605Q86T29 641 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 ATP11CQ8NB49 1132 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 C1orf131Q8NDD1 294 aaKnown RBP13.32□□□□□ -0.28
HDAC6-227ENST00000485102 ARRDC3Q96B67 414 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 BMFQ96LC9 184 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 APOLD1Q96LR9 279 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 NPY6RQ99463 290 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 LGMNQ99538 433 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
HDAC6-227ENST00000485102 DPH1Q9BZG8 443 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 MUC3BQ9H195 1237 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 POLR1BQ9H9Y6 1135 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 DYRK4Q9NR20 520 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 VPS51Q9UID3 782 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 PCDHB1Q9Y5F3 818 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 U3KQA8 63 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 AHCTF1Q8WYP5 2266 aa13.32□□□□□ -0.28
HDAC6-227ENST00000485102 SPTA1P02549 2419 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 IGLV3-10A0A075B6K4 115 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 A6NNZ2 444 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 K7ESM1 405 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 M0QYT0 321 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 SMAD6O43541 496 aaKnown RBP13.31□□□□□ -0.28
HDAC6-227ENST00000485102 AP1G1O43747 822 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 ZNF821O75541 412 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-227ENST00000485102 DAB1O75553 588 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 CNTN5O94779 1100 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 F9P00740 461 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 NUMBP49757 651 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 RPS21P63220 83 aaKnown RBP13.31□□□□□ -0.28
HDAC6-227ENST00000485102 CFHR1Q03591 330 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 PAK1Q13153 545 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 NME3Q13232 169 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 ALFQ53S48 1182 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 ARTNQ5T4W7 220 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 OTUD1Q5VV17 481 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-227ENST00000485102 KYAT3Q6YP21 454 aaKnown RBP13.31□□□□□ -0.28
HDAC6-227ENST00000485102 ZNF783Q6ZMS7 281 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 FAM183BPQ6ZVS7 135 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 PLPP6Q8IY26 295 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 SLC22A18ASQ8N1D0 253 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 PPP1R16AQ96I34 528 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 LENG8Q96PV6 779 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-227ENST00000485102 CEP44Q9C0F1 390 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 WDCPQ9H6R7 721 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 NCKIPSDQ9NZQ3 722 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 APEX2Q9UBZ4 518 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 PAXBP1Q9Y5B6 917 aa13.31□□□□□ -0.28
HDAC6-227ENST00000485102 SYNJ2BP-COX16A0A087WUM0 186 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 SPTY2D1-AS1A0A0U1RR47 76 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 I6L893 689 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-227ENST00000485102 K7ERQ8 282 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 SNAP91O60641 907 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 GRAP2O75791 330 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 PCDH8O95206 1070 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 ADCY5O95622 1261 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 CSF2P04141 144 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 MPOP05164 745 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 RHOCP08134 193 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 NME1P15531 152 aaKnown RBP13.3□□□□□ -0.28
HDAC6-227ENST00000485102 SCNN1AP37088 669 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 TMPRSS3P57727 454 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 CXADRP78310 365 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 SKOR1P84550 965 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 PTK2Q05397 1052 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 BROXQ5VW32 411 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 OR6B2Q6IFH4 312 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 KIAA1161Q6NSJ0 714 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 ZCCHC8Q6NZY4 707 aaKnown RBP13.3□□□□□ -0.28
HDAC6-227ENST00000485102 LRRC31Q6UY01 552 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 Q6ZSR6 202 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 CHST14Q8NCH0 376 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 TPCN2Q8NHX9 752 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 ASB12Q8WXK4 309 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 KLK6Q92876 244 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 FEM1CQ96JP0 617 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 CALN1Q9BXU9 219 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 SLC17A9Q9BYT1 436 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 TKTL2Q9H0I9 626 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 SIK2Q9H0K1 926 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 ASCL3Q9NQ33 180 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 ANLNQ9NQW6 1124 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 PIGVQ9NUD9 493 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 COX16Q9P0S2 106 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 ZNF212Q9UDV6 495 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 IL36AQ9UHA7 158 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 SALL4Q9UJQ4 1053 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 WASF2Q9Y6W5 498 aa13.3□□□□□ -0.28
HDAC6-227ENST00000485102 A0A0D9SEW6 157 aa13.29□□□□□ -0.28
HDAC6-227ENST00000485102 ILVBLA1L0T0 632 aa13.29□□□□□ -0.28
HDAC6-227ENST00000485102 RNF103O00237 685 aa13.29□□□□□ -0.28
HDAC6-227ENST00000485102 TPP1O14773 563 aa13.29□□□□□ -0.28
HDAC6-227ENST00000485102 FFAR2O15552 330 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms