RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 PLA2G2CQ5R387 149 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 ACBD5Q5T8D3 534 aaPredicted RBP12.69□□□□□ -0.38
APTX-220ENST00000476858 ZNF783Q6ZMS7 281 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 DPY19L3Q6ZPD9 716 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 METTL3Q86U44 580 aaKnown RBP12.69□□□□□ -0.38
APTX-220ENST00000476858 FAM71BQ8TC56 605 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 RFFLQ8WZ73 363 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 ZNF419Q96HQ0 510 aaPredicted RBP12.69□□□□□ -0.38
APTX-220ENST00000476858 HSPA12BQ96MM6 686 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 MAGEH1Q9H213 219 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 EBF2Q9HAK2 575 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 PDFQ9HBH1 243 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 TMEM51Q9NW97 253 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 RAB23Q9ULC3 237 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 PPM1HQ9ULR3 514 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 EPN1Q9Y6I3 576 aaPredicted RBP12.69□□□□□ -0.38
APTX-220ENST00000476858 WASF2Q9Y6W5 498 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 SPAG17Q6Q759 2223 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 PIEZO1Q92508 2521 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 CEP192Q8TEP8 1941 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 RIF1Q5UIP0 2472 aaKnown RBP12.68□□□□□ -0.38
APTX-220ENST00000476858 TTC24A2A3L6 582 aaPredicted RBP12.68□□□□□ -0.38
APTX-220ENST00000476858 C3orf70A6NLC5 250 aaPredicted RBP12.68□□□□□ -0.38
APTX-220ENST00000476858 EIF3CLB5ME19 914 aaKnown RBP12.68□□□□□ -0.38
APTX-220ENST00000476858 MUSKO15146 869 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 BUB1BO60566 1050 aaPredicted RBP12.68□□□□□ -0.38
APTX-220ENST00000476858 TMCC1O94876 653 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 IL1BP01584 269 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 TNNT1P13805 278 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 MPLP40238 635 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 DNA2P51530 1060 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 CDH6P55285 790 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 CNTN1Q12860 1018 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 ACAP1Q15027 740 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 LLGL1Q15334 1064 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 ZNF354CQ86Y25 554 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 PQLC3Q8N755 202 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 PCDH19Q8TAB3 1148 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 GRIN3AQ8TCU5 1115 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 TEKT4Q8WW24 435 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 PIGKQ92643 395 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 EXOC2Q96KP1 924 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 SPACA7Q96KW9 195 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 EIF3CQ99613 913 aaKnown RBP12.68□□□□□ -0.38
APTX-220ENST00000476858 CATSPERBQ9H7T0 1116 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 SEMA4GQ9NTN9 838 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 FBXL12Q9NXK8 326 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 LHX3Q9UBR4 397 aa12.68□□□□□ -0.38
APTX-220ENST00000476858 NUP205Q92621 2012 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 C10orf142B7Z368 130 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 DFFAO00273 331 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 WNT9AO14904 365 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 MCF2LO15068 1137 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 FGF10O15520 208 aaPredicted RBP12.67□□□□□ -0.38
APTX-220ENST00000476858 DAPK3O43293 454 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 BUB1O43683 1085 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 MFSD11O43934 449 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 ZNF217O75362 1048 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 RNASEH2AO75792 299 aaKnown RBP12.67□□□□□ -0.38
APTX-220ENST00000476858 PEX11BO96011 259 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 DNTTP04053 509 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 ACADMP11310 421 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 HOXB1P14653 301 aaPredicted RBP12.67□□□□□ -0.38
APTX-220ENST00000476858 COMTP21964 271 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 CHRNA3P32297 505 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 ETFBP38117 255 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 HCAR3P49019 387 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 CCNHP51946 323 aaPredicted RBP12.67□□□□□ -0.38
APTX-220ENST00000476858 TAS2R38P59533 333 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 PPP2CBP62714 309 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 PPP2CAP67775 309 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 ZNF33AQ06730 810 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 ELAVL3Q14576 367 aaKnown RBP12.67□□□□□ -0.38
APTX-220ENST00000476858 TCEAL1Q15170 157 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 ELF2Q15723 593 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 BOLA3Q53S33 107 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 ARSIQ5FYB1 569 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 LAYNQ6UX15 382 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 LPCAT2Q7L5N7 544 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 PSTKQ8IV42 348 aaKnown RBP12.67□□□□□ -0.38
APTX-220ENST00000476858 CCDC170Q8IYT3 715 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 HDDC3Q8N4P3 179 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 OR2I1PQ8NGU4 316 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 PIP4K2CQ8TBX8 421 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 BAG1Q99933 345 aaPredicted RBP12.67□□□□□ -0.38
APTX-220ENST00000476858 ORAI3Q9BRQ5 295 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 CAAP1Q9H8G2 361 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 GMEB2Q9UKD1 530 aa12.67□□□□□ -0.38
APTX-220ENST00000476858 FAM47DPA6NHR8 397 aa12.66□□□□□ -0.38
APTX-220ENST00000476858 H3BRJ5 948 aa12.66□□□□□ -0.38
APTX-220ENST00000476858 PRAMEF11O60813 436 aa12.66□□□□□ -0.38
APTX-220ENST00000476858 LEFTY1O75610 366 aa12.66□□□□□ -0.38
APTX-220ENST00000476858 RHOBTB1O94844 696 aa12.66□□□□□ -0.38
APTX-220ENST00000476858 IGHV4-34P06331 123 aa12.66□□□□□ -0.38
APTX-220ENST00000476858 ITIH2P19823 946 aa12.66□□□□□ -0.38
APTX-220ENST00000476858 MAN1A1P33908 653 aa12.66□□□□□ -0.38
APTX-220ENST00000476858 NNMTP40261 264 aa12.66□□□□□ -0.38
APTX-220ENST00000476858 YBEYP58557 167 aaPredicted RBP12.66□□□□□ -0.38
APTX-220ENST00000476858 SLC10A2Q12908 348 aaPredicted RBP12.66□□□□□ -0.38
APTX-220ENST00000476858 KRT81Q14533 505 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms