RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 TTC25Q96NG3 672 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 SERPINB12Q96P63 405 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 ZIM3Q96PE6 472 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 RBM15Q96T37 977 aaKnown RBP eCLIP6.75□□□□□ -1.33
ATG4A-207ENST00000474825 WDR83Q9BRX9 315 aaKnown RBP6.75□□□□□ -1.33
ATG4A-207ENST00000474825 CDC42EP4Q9H3Q1 356 aaKnown RBP6.75□□□□□ -1.33
ATG4A-207ENST00000474825 NSUN3Q9H649 340 aaKnown RBP6.75□□□□□ -1.33
ATG4A-207ENST00000474825 CERS4Q9HA82 394 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 KIF9Q9HAQ2 790 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 GLOD4Q9HC38 313 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 XAB2Q9HCS7 855 aaKnown RBP6.75□□□□□ -1.33
ATG4A-207ENST00000474825 TRPC7Q9HCX4 862 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 TDP1Q9NUW8 608 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 SMPD4Q9NXE4 827 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 OBP2AQ9NY56 170 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 NINJ2Q9NZG7 142 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 MARK1Q9P0L2 795 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 CFAP97Q9P2B7 532 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 FETUBQ9UGM5 382 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 FCF1Q9Y324 198 aaKnown RBP6.75□□□□□ -1.33
ATG4A-207ENST00000474825 TEX264Q9Y6I9 313 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 REV3LO60673 3130 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 OBSL1O75147 1896 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 GBF1Q92538 1859 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 SZT2Q5T011 3432 aa6.75□□□□□ -1.33
ATG4A-207ENST00000474825 DENND4CQ5VZ89 1909 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 A0A0D9SEW6 157 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 J3KR12 359 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 AP3B1O00203 1094 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 LUC7L3O95232 432 aaKnown RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 CD160O95971 181 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 APRTP07741 180 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 GSTA2P09210 222 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 IRF1P10914 325 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 CEBPBP17676 345 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 CR2P20023 1033 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 IGFBP4P22692 258 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 LORP23490 312 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 PSMB4P28070 264 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ADRA1AP35348 466 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ACVRL1P37023 503 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 AVPR1AP37288 418 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 TNNT3P45378 269 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 MMP13P45452 471 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 RENBPP51606 427 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 OXCT1P55809 520 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ARL4CP56559 192 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 NTHL1P78549 312 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 GAD2Q05329 585 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ZNF177Q13360 481 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 SLC12A1Q13621 1099 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 SLC29A2Q14542 456 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 MSS51Q4VC12 460 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 INO80DQ53TQ3 878 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 EMC10Q5UCC4 262 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ANKRD54Q6NXT1 300 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 LRRC8BQ6P9F7 803 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 SYCE2Q6PIF2 218 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ARHGEF18Q6ZSZ5 1173 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 CENPUQ71F23 418 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 TFAP2DQ7Z6R9 452 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 RBM23Q86U06 439 aaKnown RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 CIR1Q86X95 450 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 CCDC117Q8IWD4 279 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 BBS7Q8IWZ6 715 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ADGRG2Q8IZP9 1017 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 PDIK1LQ8N165 341 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 CFAP52Q8N1V2 620 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 CCDC33Q8N5R6 958 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ZNF557Q8N988 423 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 FIBINQ8TAL6 211 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ITFG1Q8TB96 612 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 DEPDC1BQ8WUY9 529 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 SMG7Q92540 1137 aaKnown RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 IMP4Q96G21 291 aaKnown RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 SIGLEC10Q96LC7 697 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ZSWIM3Q96MP5 696 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 PSKH2Q96QS6 385 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 MLPHQ9BV36 600 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ROPN1BQ9BZX4 212 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 SLC25A51Q9H1U9 297 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 S1PR5Q9H228 398 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ACBD3Q9H3P7 528 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ROPN1Q9HAT0 212 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 PLAC1Q9HBJ0 212 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ARNT2Q9HBZ2 717 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 LRRC4CQ9HCJ2 640 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 ATP13A1Q9HD20 1204 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 MED4Q9NPJ6 270 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 CASS4Q9NQ75 786 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 VPS45Q9NRW7 570 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 EURLQ9NYK6 297 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 GDE1Q9NZC3 331 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 KLHL8Q9P2G9 620 aaPredicted RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 TBC1D14Q9P2M4 693 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 FBXO10Q9UK96 956 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 CCL26Q9Y258 94 aa6.74□□□□□ -1.33
ATG4A-207ENST00000474825 MRPS23Q9Y3D9 190 aaKnown RBP6.74□□□□□ -1.33
ATG4A-207ENST00000474825 SH3BP1Q9Y3L3 701 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms