RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ZNF234Q14588 700 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 PDK2Q15119 407 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 HADHQ16836 314 aaKnown RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 ANKRD20A8PQ5CZ79 823 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 FAM182AQ5T1J6 154 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 NCBP2-AS2Q69YL0 99 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 HEATR6Q6AI08 1181 aaKnown RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 SLC9A4Q6AI14 798 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 TCEAL6Q6IPX3 200 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 C1orf228Q6PIY5 440 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 TMEM92Q6UXU6 159 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 LINGO4Q6UY18 593 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 ZNF783Q6ZMS7 281 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 MAMSTRQ6ZN01 415 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 ARHGAP36Q6ZRI8 547 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 CEP68Q76N32 757 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 AHI1Q8N157 1196 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 CCDC33Q8N5R6 958 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 PLD5Q8N7P1 536 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 KCTD6Q8NC69 237 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 RPLP0P6Q8NHW5 317 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 WFIKKN2Q8TEU8 576 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 LRRN4Q8WUT4 740 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 ARHGEF2Q92974 986 aaKnown RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 TCEAL3Q969E4 200 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 RNF25Q96BH1 459 aaPredicted RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 HMCESQ96FZ2 354 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 CELF6Q96J87 481 aaKnown RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 CALR3Q96L12 384 aaKnown RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 RNF157Q96PX1 679 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 ZNF670Q9BS34 389 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 TLR10Q9BXR5 811 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 CALN1Q9BXU9 219 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 TSGA10Q9BZW7 698 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 SLC39A8Q9C0K1 460 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 TMEM245Q9H330 911 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 RETREG1Q9H6L5 497 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 KCND1Q9NSA2 647 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 RCOR3Q9P2K3 495 aaPredicted RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 THAP10Q9P2Z0 257 aaPredicted RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 VPS51Q9UID3 782 aa7.15□□□□□ -1.26
LIMD1-204ENST00000474665 MRPS17Q9Y2R5 130 aaKnown RBP7.15□□□□□ -1.26
LIMD1-204ENST00000474665 hCG_1818297A0A087WSY0 165 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 TCRBV7S2A1N4TA0A589 114 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 TYW5A2RUC4 315 aaKnown RBP7.14□□□□□ -1.27
LIMD1-204ENST00000474665 TTC34A8MYJ7 566 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 ZNF487B1APH4 448 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 H3BRJ5 948 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 J3KR12 359 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 K7ESF4 209 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 RNF103O00237 685 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 LAMA5O15230 3695 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 TIMM44O43615 452 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 MFSD11O43934 449 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 MAP3K6O95382 1288 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 PEX11BO96011 259 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 DLDP09622 509 aaKnown RBP7.14□□□□□ -1.27
LIMD1-204ENST00000474665 VAV1P15498 845 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 DESP17661 470 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 IL12RB1P42701 662 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 WASP42768 502 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 PAPOLAP51003 745 aaKnown RBP7.14□□□□□ -1.27
LIMD1-204ENST00000474665 ZNF135P52742 658 aaPredicted RBP7.14□□□□□ -1.27
LIMD1-204ENST00000474665 MRPS21P82921 87 aaKnown RBP7.14□□□□□ -1.27
LIMD1-204ENST00000474665 ECT2LQ008S8 904 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 SATB1Q01826 763 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 GBE1Q04446 702 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 SERINC3Q13530 473 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 SLC12A1Q13621 1099 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 KRT81Q14533 505 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 DMC1Q14565 340 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 POLD3Q15054 466 aaPredicted RBP7.14□□□□□ -1.27
LIMD1-204ENST00000474665 EIF4HQ15056 248 aaKnown RBP7.14□□□□□ -1.27
LIMD1-204ENST00000474665 PAFAH1B3Q15102 231 aaKnown RBP7.14□□□□□ -1.27
LIMD1-204ENST00000474665 FBXO43Q4G163 708 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 C6orf118Q5T5N4 469 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 MEI1Q5TIA1 1274 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 LEKR1Q6ZMV7 388 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 SPOCD1Q6ZMY3 1216 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 PEX26Q7Z412 305 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 VSIG1Q86XK7 387 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 SYNPOQ8N3V7 929 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 SPEM1Q8N4L4 309 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 ZNF366Q8N895 744 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 ZNF513Q8N8E2 541 aaPredicted RBP7.14□□□□□ -1.27
LIMD1-204ENST00000474665 DCAF4L2Q8NA75 395 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 TXNDC5Q8NBS9 432 aaKnown RBP7.14□□□□□ -1.27
LIMD1-204ENST00000474665 EXD1Q8NHP7 514 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 FRS2Q8WU20 508 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 ERLEC1Q96DZ1 483 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 CRELD1Q96HD1 420 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 RPL10LQ96L21 214 aaKnown RBP7.14□□□□□ -1.27
LIMD1-204ENST00000474665 GABRG3Q99928 467 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 SPON2Q9BUD6 331 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 CIPCQ9C0C6 399 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 MUC3BQ9H195 1237 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 MAGEH1Q9H213 219 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 CATSPERBQ9H7T0 1116 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 PDFQ9HBH1 243 aa7.14□□□□□ -1.27
LIMD1-204ENST00000474665 DTLQ9NZJ0 730 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms