RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 OR14C36Q8NHC7 312 aa9.34□□□□□ -0.91
SYN3-211ENST00000472027 CCDC42Q96M95 316 aa9.34□□□□□ -0.91
SYN3-211ENST00000472027 KCTD15Q96SI1 283 aaPredicted RBP9.34□□□□□ -0.91
SYN3-211ENST00000472027 EIF3CQ99613 913 aaKnown RBP9.34□□□□□ -0.91
SYN3-211ENST00000472027 PACSIN1Q9BY11 444 aa9.34□□□□□ -0.91
SYN3-211ENST00000472027 CEP44Q9C0F1 390 aa9.34□□□□□ -0.91
SYN3-211ENST00000472027 ZWILCHQ9H900 591 aa9.34□□□□□ -0.91
SYN3-211ENST00000472027 NHEJ1Q9H9Q4 299 aaPredicted RBP9.34□□□□□ -0.91
SYN3-211ENST00000472027 CAPN10Q9HC96 672 aa9.34□□□□□ -0.91
SYN3-211ENST00000472027 DONSONQ9NYP3 566 aa9.34□□□□□ -0.91
SYN3-211ENST00000472027 SUSD2Q9UGT4 822 aa9.34□□□□□ -0.91
SYN3-211ENST00000472027 IL36AQ9UHA7 158 aa9.34□□□□□ -0.91
SYN3-211ENST00000472027 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.34□□□□□ -0.91
SYN3-211ENST00000472027 FCF1Q9Y324 198 aaKnown RBP9.34□□□□□ -0.91
SYN3-211ENST00000472027 TBC1D3DA0A087WVF3 549 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 TBC1D3IA0A087WXS9 549 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 TBC1D3EA0A087X179 549 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 TBC1D3KA0A087X1G2 549 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 A0A1B0GTW7 788 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 TBC1D3FA6NER0 549 aaPredicted RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 LRRC72A6NJI9 287 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 C4orf47A7E2U8 309 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 TBC1D3LB9A6J9 549 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 RASA4BC9J798 803 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 RNF103O00237 685 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 PLK4O00444 970 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 KPNA3O00505 521 aaPredicted RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 TM4SF5O14894 197 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 BCAT2O15382 392 aaPredicted RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 RASA4O43374 803 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 BUB1O43683 1085 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 PRNPP04156 253 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 IGHV4-34P06331 123 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 TBC1D3HP0C7X1 549 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 RARAP10276 462 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 ERCC2P18074 760 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 MAPK8P45983 427 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 HCAR3P49019 387 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 NDST2P52849 883 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 ADPRHP54922 357 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 GEMIN4P57678 1058 aaKnown RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 CNTN1Q12860 1018 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 SERINC3Q13530 473 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 SMTNL2Q2TAL5 461 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 PARP15Q460N3 678 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 PPP6R3Q5H9R7 873 aaPredicted RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 TBC1D3GQ6DHY5 549 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 TBC1D3CQ6IPX1 549 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 RFX8Q6ZV50 586 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 DGLUCYQ7Z3D6 616 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 PLPP6Q8IY26 295 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 TBC1D3Q8IZP1 549 aaPredicted RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 ZCCHC9Q8N567 271 aaKnown RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 OR2T34Q8NGX1 318 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 C1orf216Q8TAB5 229 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 ZNF564Q8TBZ8 553 aaPredicted RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 CTNNBL1Q8WYA6 563 aaPredicted RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 SNX19Q92543 992 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 HSPH1Q92598 858 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 FAM131CQ96AQ9 280 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 ISG20Q96AZ6 181 aaKnown RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 HMCESQ96FZ2 354 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 CELF6Q96J87 481 aaKnown RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 HEPHQ9BQS7 1158 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 GTPBP2Q9BX10 602 aaKnown RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 SLC39A8Q9C0K1 460 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 KLC2Q9H0B6 622 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 LRRC19Q9H756 370 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 TMEM9BQ9NQ34 198 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 SPTLC3Q9NUV7 552 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 CWC15Q9P013 229 aaKnown RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 CTTNBP2NLQ9P2B4 639 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 UVRAGQ9P2Y5 699 aa9.33□□□□□ -0.92
SYN3-211ENST00000472027 HECAQ9UBI9 543 aaPredicted RBP9.33□□□□□ -0.92
SYN3-211ENST00000472027 OTOGLQ3ZCN5 2332 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 A0A1W2PPC4 97 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 ZSCAN5CA6NGD5 496 aaPredicted RBP9.32□□□□□ -0.92
SYN3-211ENST00000472027 C10orf142B7Z368 130 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 ARHGAP33O14559 1287 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 SLC7A4O43246 635 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 PLRG1O43660 514 aaKnown RBP9.32□□□□□ -0.92
SYN3-211ENST00000472027 LEFTY1O75610 366 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 SYPP08247 313 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 TMEM253P0C7T8 217 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 CD27P26842 260 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 SSR1P43307 286 aaKnown RBP9.32□□□□□ -0.92
SYN3-211ENST00000472027 PAPOLAP51003 745 aaKnown RBP9.32□□□□□ -0.92
SYN3-211ENST00000472027 ZNF75DP51815 510 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 CCNHP51946 323 aaPredicted RBP9.32□□□□□ -0.92
SYN3-211ENST00000472027 ZNF135P52742 658 aaPredicted RBP9.32□□□□□ -0.92
SYN3-211ENST00000472027 ATXN3P54252 364 aaPredicted RBP9.32□□□□□ -0.92
SYN3-211ENST00000472027 SNRPD1P62314 119 aaKnown RBP9.32□□□□□ -0.92
SYN3-211ENST00000472027 SLC25A11Q02978 314 aaKnown RBP9.32□□□□□ -0.92
SYN3-211ENST00000472027 CYTH1Q15438 398 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 DPYSL2Q16555 572 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 HADHQ16836 314 aaKnown RBP9.32□□□□□ -0.92
SYN3-211ENST00000472027 INO80DQ53TQ3 878 aaPredicted RBP9.32□□□□□ -0.92
SYN3-211ENST00000472027 AGBL4Q5VU57 503 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 TXNRD3NBQ6F5E7 133 aa9.32□□□□□ -0.92
SYN3-211ENST00000472027 ERMP1Q7Z2K6 904 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms