RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PUM3Q15397 648 aaKnown RBP6.04□□□□□ -1.44
CCDC39-202ENST00000471307 KLHL17Q6TDP4 642 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 SLC16A12Q6ZSM3 486 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 KDM1BQ8NB78 822 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 FAM110DQ8TAY7 271 aaPredicted RBP6.04□□□□□ -1.44
CCDC39-202ENST00000471307 OIT3Q8WWZ8 545 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 PIGSQ96S52 555 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 CHMP4AQ9BY43 222 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 BRD8Q9H0E9 1235 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 ACTR5Q9H9F9 607 aaPredicted RBP6.04□□□□□ -1.44
CCDC39-202ENST00000471307 ZNF304Q9HCX3 659 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 FBXO4Q9UKT5 387 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 PCDHA10Q9Y5I2 948 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 NEURL4Q96JN8 1562 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 PREX1Q8TCU6 1659 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 KIF1BO60333 1816 aa6.04□□□□□ -1.44
CCDC39-202ENST00000471307 TRIP12Q14669 1992 aaPredicted RBP6.04□□□□□ -1.44
CCDC39-202ENST00000471307 ERVK-7P63135 1459 aa6.03□□□□□ -1.44
CCDC39-202ENST00000471307 SPATA31E1Q6ZUB1 1445 aa6.03□□□□□ -1.44
CCDC39-202ENST00000471307 ABHD14A-ACY1A0A1B0GW23 586 aa6.03□□□□□ -1.44
CCDC39-202ENST00000471307 GTPBP1O00178 669 aaKnown RBP6.03□□□□□ -1.44
CCDC39-202ENST00000471307 HEXIM1O94992 359 aaKnown RBP6.03□□□□□ -1.44
CCDC39-202ENST00000471307 GALNT1Q10472 559 aaPredicted RBP6.03□□□□□ -1.44
CCDC39-202ENST00000471307 SLC30A9Q6PML9 568 aa6.03□□□□□ -1.44
CCDC39-202ENST00000471307 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.03□□□□□ -1.44
CCDC39-202ENST00000471307 DPP10Q8N608 796 aa6.03□□□□□ -1.44
CCDC39-202ENST00000471307 URB1-AS1Q96HZ7 61 aa6.03□□□□□ -1.44
CCDC39-202ENST00000471307 WDR77Q9BQA1 342 aaPredicted RBP6.03□□□□□ -1.44
CCDC39-202ENST00000471307 PABPC3Q9H361 631 aaKnown RBP6.03□□□□□ -1.44
CCDC39-202ENST00000471307 ELAC1Q9H777 363 aaKnown RBP6.03□□□□□ -1.44
CCDC39-202ENST00000471307 SLC22A11Q9NSA0 550 aa6.03□□□□□ -1.44
CCDC39-202ENST00000471307 SLC25A13Q9UJS0 675 aa6.03□□□□□ -1.44
CCDC39-202ENST00000471307 BAG5Q9UL15 447 aa6.03□□□□□ -1.44
CCDC39-202ENST00000471307 ADAMTSL3P82987 1691 aa6.03□□□□□ -1.44
CCDC39-202ENST00000471307 CLTCL1P53675 1640 aa6.03□□□□□ -1.44
CCDC39-202ENST00000471307 SPATA31D1Q6ZQQ2 1576 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 OR6C75A6NL08 312 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 C4orf47A7E2U8 309 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 PRR23D1E9PI22 279 aaPredicted RBP6.02□□□□□ -1.45
CCDC39-202ENST00000471307 SPRY3O43610 288 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 CYP1A2P05177 515 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 PRR23D2P0DMB1 279 aaPredicted RBP6.02□□□□□ -1.45
CCDC39-202ENST00000471307 GYS1P13807 737 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 CPA1P15085 419 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 PRPH2P23942 346 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 SERPINB3P29508 390 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 SERPINA4P29622 427 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 ENTPD1P49961 510 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 CYP2J2P51589 502 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 ZBTB16Q05516 673 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 RPS6KA2Q15349 733 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 SLC4A8Q2Y0W8 1093 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 C5orf22Q49AR2 442 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 OTUD1Q5VV17 481 aaPredicted RBP6.02□□□□□ -1.45
CCDC39-202ENST00000471307 DGAT2L7PQ6IED9 249 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 CCDC25Q86WR0 208 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 SPATA2LQ8IUW3 424 aaPredicted RBP6.02□□□□□ -1.45
CCDC39-202ENST00000471307 CCDC117Q8IWD4 279 aaPredicted RBP6.02□□□□□ -1.45
CCDC39-202ENST00000471307 FAM217AQ8IXS0 508 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 CCDC146Q8IYE0 955 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 ELP5Q8TE02 316 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 CTAGE1Q96RT6 745 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 RMDN3Q96TC7 470 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 FRMD8Q9BZ67 464 aaPredicted RBP6.02□□□□□ -1.45
CCDC39-202ENST00000471307 B3GNT4Q9C0J1 378 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 MAGEH1Q9H213 219 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 Q9N2J8 555 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 ZDHHC7Q9NXF8 308 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 NCKIPSDQ9NZQ3 722 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 MYO6Q9UM54 1294 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 PIK3C2BO00750 1634 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 TNRQ92752 1358 aa6.02□□□□□ -1.45
CCDC39-202ENST00000471307 SYNMO15061 1565 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 GRM8O00222 908 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 MYZAPP0CAP1 466 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 PKMP14618 531 aaKnown RBP6.01□□□□□ -1.45
CCDC39-202ENST00000471307 HOXD3P31249 432 aaPredicted RBP6.01□□□□□ -1.45
CCDC39-202ENST00000471307 TNFSF8P32971 234 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 ZP1P60852 638 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 CDK18Q07002 472 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 FOXO1Q12778 655 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 ALKBH1Q13686 389 aaKnown RBP6.01□□□□□ -1.45
CCDC39-202ENST00000471307 DCTN1Q14203 1278 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 GPR18Q14330 331 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 GALNTL6Q49A17 601 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 FAM171A1Q5VUB5 890 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 TANGO2Q6ICL3 276 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 Q6ZTK2 550 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 PHF21BQ96EK2 531 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 ZNF333Q96JL9 665 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 FRG2BQ96QU4 278 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 DCLK3Q9C098 648 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 CATSPERBQ9H7T0 1116 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 TMEM248Q9NWD8 314 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 NLRP1Q9C000 1473 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 C3P01024 1663 aa6.01□□□□□ -1.45
CCDC39-202ENST00000471307 UHRF1BP1Q6BDS2 1440 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 MADDQ8WXG6 1647 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 SAC3D1A6NKF1 404 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 CCNT1O60563 726 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms